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    aox5 aldehyde oxidase 5 [ Danio rerio (zebrafish) ]

    Gene ID: 64265, updated on 27-Jan-2018
    Official Symbol
    aox5provided by ZNC
    Official Full Name
    aldehyde oxidase 5provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-001205-2
    See related
    Ensembl:ENSDARG00000071475 Vega:OTTDARG00000010181
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    xdh; aox3; fc18g02; wu:fc18g02; etID47878.22
    Location:
    chromosome: 22
    Exon count:
    35
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (14084036..14115316, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (14059259..14090539, complement)

    Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene ADP-ribosylation factor-like 4Ca Neighboring gene aldehyde oxidase 6 Neighboring gene si:ch211-246m6.4 Neighboring gene hatching enzyme 1, tandem duplicate 1 Neighboring gene hatching enzyme 1, tandem dupliate 2 Neighboring gene si:ch211-246m6.5 Neighboring gene hatching enzyme 1, tandem duplicate 3 Neighboring gene basic leucine zipper and W2 domains 1a Neighboring gene uncharacterized LOC101883810

    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    2 iron, 2 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
     
    catalytic activity IEA
    Inferred from Electronic Annotation
    more info
     
    electron transfer activity IEA
    Inferred from Electronic Annotation
    more info
     
    flavin adenine dinucleotide binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    iron ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    iron-sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
     
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    oxidoreductase activity, acting on CH-OH group of donors IEA
    Inferred from Electronic Annotation
    more info
     
    oxidoreductase activity, acting on the aldehyde or oxo group of donors IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    xanthine dehydrogenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    xanthine dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
     
    xanthine oxidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    oxidation-reduction process IEA
    Inferred from Electronic Annotation
    more info
     
    xanthine catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Preferred Names
    xanthine dehydrogenase
    Names
    aldehyde oxidase 3
    aldehyde oxidase alpha
    aox alpha
    aox2
    aoxa
    xanthene dehydrogenase
    NP_001265725.1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001278796.1NP_001265725.1  xanthine dehydrogenase

      See identical proteins and their annotated locations for NP_001265725.1

      Status: PROVISIONAL

      Source sequence(s)
      BK008657
      UniProtKB/TrEMBL
      M1ZMM0
      Related
      ENSDARP00000134334.1, ENSDART00000165670.1
      Conserved Domains (6) summary
      TIGR02969
      Location:81336
      mam_aldehyde_ox; aldehyde oxidase
      smart01008
      Location:591696
      Ald_Xan_dh_C; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
      pfam00941
      Location:237417
      FAD_binding_5; FAD binding domain in molybdopterin dehydrogenase
      pfam01799
      Location:91162
      Fer2_2; [2Fe-2S] binding domain
      pfam02738
      Location:7181243
      Ald_Xan_dh_C2; Molybdopterin-binding domain of aldehyde dehydrogenase
      pfam03450
      Location:424528
      CO_deh_flav_C; CO dehydrogenase flavoprotein C-terminal domain

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007133.7 Reference GRCz11 Primary Assembly

      Range
      14084036..14115316 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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