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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_008806.1 RefSeqGene
- Range
-
5045..83826
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_000053.4 → NP_000044.2 copper-transporting ATPase 2 isoform a
See identical proteins and their annotated locations for NP_000044.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript, and encodes the longest isoform (a).
- Source sequence(s)
-
AL162377, BC143976, BU682287, DA125470, U11700
- Consensus CDS
-
CCDS41892.1
- UniProtKB/Swiss-Prot
-
P35670
- UniProtKB/TrEMBL
- A0A024RDX3, B7ZLR4
- Related
- ENSP00000242839.4, ENST00000242839.9
- Conserved Domains (4) summary
-
- COG2217
Location:566 → 1355
- ZntA; Cation transport ATPase [Inorganic ion transport and metabolism]
- COG4087
Location:1206 → 1309
- COG4087; Soluble P-type ATPase [General function prediction only]
- cd00371
Location:363 → 425
- HMA; Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain ...
- pfam00122
Location:769 → 1016
- E1-E2_ATPase; E1-E2 ATPase
-
NM_001005918.3 → NP_001005918.1 copper-transporting ATPase 2 isoform b
See identical proteins and their annotated locations for NP_001005918.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) has multiple differences in the coding region but maintains the reading frame, compared to variant 1. The resulting isoform (b) is shorter than isoform a.
- Source sequence(s)
-
AL162377, BC143976, BU682287, DA125470
- Consensus CDS
-
CCDS45049.1
- UniProtKB/TrEMBL
-
B7ZLR4
- Related
- ENSP00000342559.5, ENST00000344297.9
- Conserved Domains (4) summary
-
- COG2217
Location:360 → 1148
- ZntA; Cation transport ATPase [Inorganic ion transport and metabolism]
- COG4087
Location:999 → 1102
- COG4087; Soluble P-type ATPase [General function prediction only]
- cd00371
Location:363 → 425
- HMA; Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain ...
- pfam00122
Location:621 → 809
- E1-E2_ATPase; E1-E2 ATPase
-
NM_001243182.2 → NP_001230111.1 copper-transporting ATPase 2 isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an in-frame segment in the coding region, compared to variant 1. The resulting isoform (c) lacks an internal segment, compared to isoform a.
- Source sequence(s)
-
AL162377, BC143976, BU682287, DA125470, DQ015922
- Consensus CDS
-
CCDS58293.1
- UniProtKB/Swiss-Prot
-
P35670
- UniProtKB/TrEMBL
-
B7ZLR4
- Related
- ENSP00000383217.3, ENST00000400366.6
- Conserved Domains (4) summary
-
- COG2217
Location:455 → 1244
- ZntA; Cation transport ATPase [Inorganic ion transport and metabolism]
- COG4087
Location:1095 → 1198
- COG4087; Soluble P-type ATPase [General function prediction only]
- cd00371
Location:146 → 209
- HMA; Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain ...
- pfam00122
Location:658 → 905
- E1-E2_ATPase; E1-E2 ATPase
-
NM_001330578.2 → NP_001317507.1 copper-transporting ATPase 2 isoform d
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks an alternate exon in the central coding region but maintains the reading frame, compared to variant 1. The resulting isoform (d) is shorter than isoform a.
- Source sequence(s)
-
AL162377, BC143975, BC143976, BU682287, DA125470, U11700
- Consensus CDS
-
CCDS81768.1
- UniProtKB/Swiss-Prot
-
P35670
- UniProtKB/TrEMBL
- B7ZLR3, B7ZLR4, E7ET55
- Related
- ENSP00000501168.1, ENST00000673772.1
- Conserved Domains (4) summary
-
- COG2217
Location:566 → 1277
- ZntA; Cation transport ATPase [Inorganic ion transport and metabolism]
- COG4087
Location:1128 → 1231
- COG4087; Soluble P-type ATPase [General function prediction only]
- cd00371
Location:363 → 425
- HMA; Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain ...
- pfam00122
Location:694 → 938
- E1-E2_ATPase; E1-E2 ATPase
-
NM_001330579.2 → NP_001317508.1 copper-transporting ATPase 2 isoform e
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks two consecutive alternate exons in the central coding region but maintains the reading frame, compared to variant 1. The resulting isoform (e) is shorter than isoform a.
- Source sequence(s)
-
AL162377, BC143976, BU682287, DA125470, U11700
- UniProtKB/Swiss-Prot
-
P35670
- UniProtKB/TrEMBL
-
B7ZLR4
- Related
- ENSP00000416738.3, ENST00000448424.7
- Conserved Domains (4) summary
-
- COG4087
Location:1122 → 1225
- COG4087; Soluble P-type ATPase [General function prediction only]
- cd00371
Location:363 → 425
- HMA; Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain ...
- TIGR01511
Location:626 → 1271
- ATPase-IB1_Cu; copper-(or silver)-translocating P-type ATPase
- pfam00122
Location:685 → 932
- E1-E2_ATPase; E1-E2 ATPase
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p13 Primary Assembly
Genomic
-
NC_000013.11 Reference GRCh38.p13 Primary Assembly
- Range
-
51932669..52012130 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005266430.4 → XP_005266487.1 copper-transporting ATPase 2 isoform X1
See identical proteins and their annotated locations for XP_005266487.1
- UniProtKB/Swiss-Prot
-
P35670
- UniProtKB/TrEMBL
-
A0A024RDX3
- Conserved Domains (4) summary
-
- COG2217
Location:566 → 1355
- ZntA; Cation transport ATPase [Inorganic ion transport and metabolism]
- COG4087
Location:1206 → 1309
- COG4087; Soluble P-type ATPase [General function prediction only]
- cd00371
Location:363 → 425
- HMA; Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain ...
- pfam00122
Location:769 → 1016
- E1-E2_ATPase; E1-E2 ATPase
-
XM_011535117.3 → XP_011533419.1 copper-transporting ATPase 2 isoform X3
See identical proteins and their annotated locations for XP_011533419.1
- Conserved Domains (4) summary
-
- COG2217
Location:534 → 1323
- ZntA; Cation transport ATPase [Inorganic ion transport and metabolism]
- COG4087
Location:1174 → 1277
- COG4087; Soluble P-type ATPase [General function prediction only]
- cd00371
Location:331 → 393
- HMA; Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain ...
- pfam00122
Location:737 → 984
- E1-E2_ATPase; E1-E2 ATPase
-
XM_005266431.4 → XP_005266488.1 copper-transporting ATPase 2 isoform X2
- Conserved Domains (4) summary
-
- COG2217
Location:554 → 1343
- ZntA; Cation transport ATPase [Inorganic ion transport and metabolism]
- COG4087
Location:1194 → 1297
- COG4087; Soluble P-type ATPase [General function prediction only]
- cd00371
Location:351 → 413
- HMA; Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain ...
- pfam00122
Location:757 → 1004
- E1-E2_ATPase; E1-E2 ATPase
-
XM_006719837.3 → XP_006719900.1 copper-transporting ATPase 2 isoform X3
See identical proteins and their annotated locations for XP_006719900.1
- Conserved Domains (4) summary
-
- COG2217
Location:534 → 1323
- ZntA; Cation transport ATPase [Inorganic ion transport and metabolism]
- COG4087
Location:1174 → 1277
- COG4087; Soluble P-type ATPase [General function prediction only]
- cd00371
Location:331 → 393
- HMA; Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain ...
- pfam00122
Location:737 → 984
- E1-E2_ATPase; E1-E2 ATPase
-
XM_017020627.1 → XP_016876116.1 copper-transporting ATPase 2 isoform X3
- Conserved Domains (4) summary
-
- COG2217
Location:534 → 1323
- ZntA; Cation transport ATPase [Inorganic ion transport and metabolism]
- COG4087
Location:1174 → 1277
- COG4087; Soluble P-type ATPase [General function prediction only]
- cd00371
Location:331 → 393
- HMA; Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain ...
- pfam00122
Location:737 → 984
- E1-E2_ATPase; E1-E2 ATPase
-
XM_005266424.4 → XP_005266481.1 copper-transporting ATPase 2 isoform X3
See identical proteins and their annotated locations for XP_005266481.1
- Conserved Domains (4) summary
-
- COG2217
Location:534 → 1323
- ZntA; Cation transport ATPase [Inorganic ion transport and metabolism]
- COG4087
Location:1174 → 1277
- COG4087; Soluble P-type ATPase [General function prediction only]
- cd00371
Location:331 → 393
- HMA; Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain ...
- pfam00122
Location:737 → 984
- E1-E2_ATPase; E1-E2 ATPase
-
XM_005266423.2 → XP_005266480.1 copper-transporting ATPase 2 isoform X3
See identical proteins and their annotated locations for XP_005266480.1
- Conserved Domains (4) summary
-
- COG2217
Location:534 → 1323
- ZntA; Cation transport ATPase [Inorganic ion transport and metabolism]
- COG4087
Location:1174 → 1277
- COG4087; Soluble P-type ATPase [General function prediction only]
- cd00371
Location:331 → 393
- HMA; Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain ...
- pfam00122
Location:737 → 984
- E1-E2_ATPase; E1-E2 ATPase
RNA
-
XR_941604.1 RNA Sequence