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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001033667.3 → NP_001028839.1 T-lymphocyte surface antigen Ly-9 isoform b precursor
See identical proteins and their annotated locations for NP_001028839.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 3' UTR compared to variant 1. The encoded isoform (b) is significantly shorter and has a distinct C-terminus, compared to isoform a.
- Source sequence(s)
-
AI378426, BC064485, DC406206
- Consensus CDS
-
CCDS30917.1
- UniProtKB/TrEMBL
-
A0A0C4DFU4
- Related
- ENSP00000357018.2, ENST00000368039.2
- Conserved Domains (1) summary
-
- cd16842
Location:57 → 151
- Ig_SLAM-CD84_like_N; N-terminal immunoglobulin (Ig)-like domain of the signaling lymphocyte activation molecule (SLAM) family
-
NM_001261456.2 → NP_001248385.1 T-lymphocyte surface antigen Ly-9 isoform c precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses an alternate splice site in the 3' coding region, but maintains the reading frame, compared to variant 1. The encoded isoform (c) is shorter than isoform a.
- Source sequence(s)
-
BC062589, BX090162, DC406206, L42621
- Consensus CDS
-
CCDS65695.1
- UniProtKB/Swiss-Prot
-
Q9HBG7
- Related
- ENSP00000357016.5, ENST00000368037.9
- Conserved Domains (2) summary
-
- cd05775
Location:57 → 151
- Ig_SLAM-CD84_like_N; N-terminal immunoglobulin (Ig)-like domain of the signaling lymphocyte activation molecule (SLAM) family, CD84_like
- pfam13927
Location:362 → 431
- Ig_3; Immunoglobulin domain
-
NM_001261457.2 → NP_001248386.1 T-lymphocyte surface antigen Ly-9 isoform d precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks an exon in the coding region, but maintains the reading frame, compared to variant 1. The encoded isoform (d) is shorter than isoform a.
- Source sequence(s)
-
BC027920, BC062589, BC121049, BX090162
- Consensus CDS
-
CCDS65696.1
- UniProtKB/TrEMBL
-
Q5VYH9
- Related
- ENSP00000376039.4, ENST00000392203.8
- Conserved Domains (2) summary
-
- cd05775
Location:57 → 151
- Ig_SLAM-CD84_like_N; N-terminal immunoglobulin (Ig)-like domain of the signaling lymphocyte activation molecule (SLAM) family, CD84_like
- pfam13927
Location:156 → 226
- Ig_3; Immunoglobulin domain
-
NM_002348.4 → NP_002339.2 T-lymphocyte surface antigen Ly-9 isoform a precursor
See identical proteins and their annotated locations for NP_002339.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a).
- Source sequence(s)
-
AK292048, BC062589
- Consensus CDS
-
CCDS30916.1
- UniProtKB/Swiss-Prot
- A8K7N3, Q14775, Q5VYI3, Q6P2J4, Q9H4N5, Q9HBG7, Q9NQ24
- Related
- ENSP00000263285.5, ENST00000263285.11
- Conserved Domains (2) summary
-
- cd05775
Location:57 → 151
- Ig_SLAM-CD84_like_N; N-terminal immunoglobulin (Ig)-like domain of the signaling lymphocyte activation molecule (SLAM) family, CD84_like
- pfam13927
Location:362 → 431
- Ig_3; Immunoglobulin domain