Format

Send to:

Choose Destination
    • Showing Current items.

    Ubi-p5E Ubiquitin-5E [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 326237, updated on 9-May-2019

    Summary

    Official Symbol
    Ubi-p5Eprovided by FlyBase
    Official Full Name
    Ubiquitin-5Eprovided by FlyBase
    Primary source
    FLYBASE:FBgn0086558
    Locus tag
    Dmel_CG32744
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG18282; CG32744; CR32744; Dmel\CG32744; DmUb; DmUbi-p5E; Ub; UB; Ubi; Ubiq
    Old locus tag
    CG32744

    Genomic context

    See Ubi-p5E in Genome Data Viewer
    Location:
    5E4-5E4; 1-16 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.26 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (6276876..6279647, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (6170909..6173680, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene schlank Neighboring gene uncharacterized protein Neighboring gene Spt6 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45530 Neighboring gene pseudo

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    protein tag IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    protein tag ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    ubiquitin protein ligase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    cellular protein modification process ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    modification-dependent protein catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    protein ubiquitination IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    protein ubiquitination ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    ubiquitin-dependent protein catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    polytene chromosome band IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    Ubiquitin-5E
    Names
    CG32744-PA
    CG32744-PB
    Ubi-p5E-PA
    Ubi-p5E-PB
    ubiquitin

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      6276876..6279647 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298008.1NP_001284937.1  Ubiquitin-5E, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001284937.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W418
      Related
      FBpp0311816, FBtr0345892
      Conserved Domains (2) summary
      cd01803
      Location:77152
      Ubiquitin; Ubiquitin
      smart00213
      Location:172
      UBQ; Ubiquitin homologues
    2. NM_167065.3NP_727078.1  Ubiquitin-5E, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_727078.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W418
      Related
      FBpp0070894, FBtr0070933
      Conserved Domains (2) summary
      cd01803
      Location:77152
      Ubiquitin; Ubiquitin
      smart00213
      Location:172
      UBQ; Ubiquitin homologues
    Support Center