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FBRSL1 fibrosin like 1 [ Homo sapiens (human) ]

Gene ID: 57666, updated on 12-Aug-2022

Summary

Official Symbol
FBRSL1provided by HGNC
Official Full Name
fibrosin like 1provided by HGNC
Primary source
HGNC:HGNC:29308
See related
Ensembl:ENSG00000112787 AllianceGenome:HGNC:29308
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Enables RNA binding activity. [provided by Alliance of Genome Resources, Apr 2022]
Annotation information
Note: This gene has been reviewed for its involvement in coronavirus biology, and is locus in the vicinity of disease-associated variant(s).
Expression
Ubiquitous expression in spleen (RPKM 3.9), testis (RPKM 3.8) and 25 other tissues See more
Orthologs
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Genomic context

See FBRSL1 in Genome Data Viewer
Location:
12q24.33
Exon count:
26
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (132490151..132585188)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (132540214..132635194)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (133066737..133161774)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124903060 Neighboring gene mucin 8 Neighboring gene uncharacterized LOC124903061 Neighboring gene microRNA 6763 Neighboring gene uncharacterized LOC124903062 Neighboring gene uncharacterized LOC105370094

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • KIAA1545

General protein information

Preferred Names
fibrosin-1-like protein
Names
AUTS2-like protein
HBV X-transactivated gene 9 protein
HBV XAg-transactivated protein 9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001142641.2NP_001136113.1  fibrosin-1-like protein isoform 1

    See identical proteins and their annotated locations for NP_001136113.1

    Status: VALIDATED

    Source sequence(s)
    AB046765, AC079031, AC131212, BU616646
    Consensus CDS
    CCDS45010.1
    UniProtKB/Swiss-Prot
    Q86XQ1, Q9HCM7
    Related
    ENSP00000396160.2, ENST00000434748.2
    Conserved Domains (1) summary
    pfam15336
    Location:587791
    Auts2; Autism susceptibility gene 2 protein
  2. NM_001367871.1NP_001354800.1  fibrosin-1-like protein isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC079031, AC131212
    UniProtKB/TrEMBL
    A0A7P0Z485
    Related
    ENSP00000505341.1, ENST00000680143.1
  3. NM_001382739.1NP_001369668.1  fibrosin-1-like protein isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC079031, AC131212
    Conserved Domains (1) summary
    pfam15336
    Location:562766
    Auts2; Autism susceptibility gene 2 protein
  4. NM_001382740.1NP_001369669.1  fibrosin-1-like protein isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC079031, AC131212
    Conserved Domains (1) summary
    pfam15336
    Location:404541
    Auts2; Autism susceptibility gene 2 protein
  5. NM_001382741.1NP_001369670.1  fibrosin-1-like protein isoform 5

    Status: VALIDATED

    Source sequence(s)
    AC079031
    Conserved Domains (1) summary
    PRK10263
    Location:444511
    PRK10263; DNA translocase FtsK; Provisional
  6. NM_001382742.1NP_001369671.1  fibrosin-1-like protein isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC079031
    UniProtKB/TrEMBL
    A0A1B0GUN3
    Related
    ENSP00000490180.1, ENST00000542061.2
    Conserved Domains (1) summary
    PRK10263
    Location:345412
    PRK10263; DNA translocase FtsK; Provisional
  7. NM_001382743.1NP_001369672.1  fibrosin-1-like protein isoform 7

    Status: VALIDATED

    Source sequence(s)
    AC079031, AC131212

RNA

  1. NR_168498.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079031

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    132490151..132585188
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011534812.3XP_011533114.1  fibrosin-1-like protein isoform X15

    Conserved Domains (1) summary
    pfam15336
    Location:505751
    Auts2; Autism susceptibility gene 2 protein
  2. XM_011534807.4XP_011533109.1  fibrosin-1-like protein isoform X7

    Conserved Domains (1) summary
    pfam15336
    Location:563809
    Auts2; Autism susceptibility gene 2 protein
  3. XM_005266176.5XP_005266233.1  fibrosin-1-like protein isoform X11

    Conserved Domains (1) summary
    pfam15336
    Location:544790
    Auts2; Autism susceptibility gene 2 protein
  4. XM_011534809.4XP_011533111.1  fibrosin-1-like protein isoform X13

    Conserved Domains (1) summary
    pfam15336
    Location:542788
    Auts2; Autism susceptibility gene 2 protein
  5. XM_011534803.4XP_011533105.1  fibrosin-1-like protein isoform X1

    Conserved Domains (1) summary
    pfam15336
    Location:604850
    Auts2; Autism susceptibility gene 2 protein
  6. XM_011534808.4XP_011533110.1  fibrosin-1-like protein isoform X8

    Conserved Domains (1) summary
    pfam15336
    Location:604808
    Auts2; Autism susceptibility gene 2 protein
  7. XM_011534810.4XP_011533112.1  fibrosin-1-like protein isoform X14

    Conserved Domains (1) summary
    pfam15336
    Location:604780
    Auts2; Autism susceptibility gene 2 protein
  8. XM_011534806.4XP_011533108.1  fibrosin-1-like protein isoform X6

    Conserved Domains (1) summary
    pfam15336
    Location:581827
    Auts2; Autism susceptibility gene 2 protein
  9. XM_005266171.5XP_005266228.1  fibrosin-1-like protein isoform X3

    Conserved Domains (1) summary
    pfam15336
    Location:585831
    Auts2; Autism susceptibility gene 2 protein
  10. XM_005266177.5XP_005266234.1  fibrosin-1-like protein isoform X12

    Related
    ENSP00000496901.1, ENST00000650108.1
    Conserved Domains (1) summary
    pfam15336
    Location:585789
    Auts2; Autism susceptibility gene 2 protein
  11. XM_005266175.5XP_005266232.1  fibrosin-1-like protein isoform X10

    Conserved Domains (1) summary
    pfam15336
    Location:562808
    Auts2; Autism susceptibility gene 2 protein
  12. XM_005266173.5XP_005266230.1  fibrosin-1-like protein isoform X4

    Conserved Domains (1) summary
    pfam15336
    Location:583829
    Auts2; Autism susceptibility gene 2 protein
  13. XM_011534805.4XP_011533107.1  fibrosin-1-like protein isoform X5

    Conserved Domains (1) summary
    pfam15336
    Location:581827
    Auts2; Autism susceptibility gene 2 protein
  14. XM_047429219.1XP_047285175.1  fibrosin-1-like protein isoform X9

  15. XM_011534804.4XP_011533106.1  fibrosin-1-like protein isoform X2

    Conserved Domains (1) summary
    pfam15336
    Location:603849
    Auts2; Autism susceptibility gene 2 protein
  16. XM_047429220.1XP_047285176.1  fibrosin-1-like protein isoform X16

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    132540214..132635194
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)