Abelson murine leukemia virus | 3 | 3 | 1 |
Abutilon mosaic virus | 1 | 1 | 1 |
Acanthamoeba castellanii str. Neff | 5 | 4 | 5 |
Acanthamoeba polyphaga mimivirus | 11 | 11 | 10 |
Acaryochloris marina MBIC11017 | 1 | 1 | 1 |
Acetivibrio thermocellus | 1 | 1 | 1 |
Acetivibrio thermocellus ATCC 27405 | 23 | 14 | 17 |
Acetivibrio thermocellus DSM 1313 | 1 | 1 | 1 |
Acetobacter aceti | 1 | 1 | 1 |
Acetobacter pasteurianus IFO 3283-01 | 2 | 2 | 2 |
Acetobacterium woodii DSM 1030 | 1 | 1 | 1 |
Acholeplasma laidlawii PG-8A | 1 | 1 | 1 |
Achromobacter xylosoxidans | 1 | 1 | 1 |
Achromobacter xylosoxidans A8 | 1 | 1 | 1 |
Acidianus filamentous virus 6 | 1 | 1 | 1 |
Acidianus two-tailed virus | 2 | 2 | 2 |
Acidilobus saccharovorans 345-15 | 1 | 1 | 1 |
Acidithiobacillus ferridurans | 1 | 1 | 1 |
Acidithiobacillus ferrooxidans ATCC 23270 | 17 | 16 | 16 |
Acidithiobacillus ferrooxidans ATCC 53993 | 1 | 1 | 1 |
Acidobacterium capsulatum ATCC 51196 | 1 | 1 | 1 |
Aciduliprofundum boonei T469 | 1 | 1 | 1 |
Acinetobacter baumannii | 69 | 59 | 52 |
Acinetobacter baumannii AB0057 | 7 | 5 | 6 |
Acinetobacter baumannii AB307-0294 | 2 | 2 | 2 |
Acinetobacter baumannii ACICU | 2 | 2 | 2 |
Acinetobacter baumannii ATCC 17978 | 15 | 11 | 12 |
Acinetobacter baumannii AYE | 3 | 2 | 3 |
Acinetobacter baumannii SDF | 1 | 1 | 1 |
Acinetobacter baylyi ADP1 | 5 | 3 | 5 |
Acinetobacter calcoaceticus | 2 | 2 | 1 |
Acinetobacter johnsonii ANC 3681 | 1 | 1 | 1 |
Acinetobacter nosocomialis M2 | 1 | 1 | 1 |
Acinetobacter oleivorans DR1 | 2 | 1 | 2 |
Acinetobacter phage AP205 | 1 | 1 | 1 |
Acinetobacter pittii PHEA-2 | 2 | 1 | 2 |
Acropora digitifera | 1 | 1 | 1 |
Actinobacillus pleuropneumoniae | 1 | 1 | 1 |
Actinobacillus pleuropneumoniae serovar 3 str. JL03 | 6 | 6 | 6 |
Actinobacillus pleuropneumoniae serovar 5b str. L20 | 10 | 9 | 8 |
Actinobacillus pleuropneumoniae serovar 7 str. AP76 | 1 | 1 | 1 |
Acyrthosiphon pisum (pea aphid) | 13 | 10 | 13 |
Adeno-associated virus | 1 | 1 | 1 |
Adeno-associated virus - 1 | 3 | 3 | 1 |
Adeno-associated virus - 8 | 2 | 2 | 1 |
Advenella kashmirensis WT001 | 1 | 1 | 1 |
Aedes aegypti (yellow fever mosquito) | 118 | 90 | 102 |
Aedes albopictus (Asian tiger mosquito) | 6 | 4 | 6 |
Aerococcus viridans | 1 | 1 | 1 |
Aeromonas dhakensis | 1 | 1 | 1 |
Aeromonas hydrophila | 2 | 2 | 2 |
Aeromonas hydrophila subsp. hydrophila ATCC 7966 | 11 | 11 | 10 |
Aeromonas phage Aeh1 | 3 | 2 | 2 |
Aeromonas salmonicida subsp. salmonicida | 2 | 2 | 1 |
Aeromonas salmonicida subsp. salmonicida A449 | 3 | 3 | 3 |
Aeromonas veronii | 3 | 3 | 3 |
Aeropyrum pernix K1 | 30 | 29 | 26 |
Afipia carboxidovorans OM5 | 4 | 2 | 4 |
African cassava mosaic virus | 3 | 3 | 1 |
African green monkey simian foamy virus | 2 | 2 | 1 |
African horse sickness virus | 5 | 5 | 4 |
African swine fever virus | 54 | 51 | 40 |
Agaricus bisporus var. bisporus H97 | 1 | 1 | 1 |
Aggregatibacter actinomycetemcomitans | 6 | 6 | 4 |
Aggregatibacter actinomycetemcomitans D11S-1 | 1 | 1 | 1 |
Aggregatibacter actinomycetemcomitans NUM4039 | 1 | 1 | 1 |
Agrobacterium fabrum str. C58 | 109 | 82 | 87 |
Agrobacterium radiobacter K84 | 1 | 1 | 1 |
Agrobacterium rhizogenes | 1 | 1 | 1 |
Agrobacterium tumefaciens | 55 | 41 | 29 |
Agrobacterium tumefaciens F2 | 2 | 2 | 2 |
Agrotis segetum granulovirus | 1 | 1 | 1 |
Aichi virus 1 | 3 | 3 | 1 |
Ailuropoda melanoleuca (giant panda) | 13 | 11 | 13 |
Akkermansia muciniphila | 1 | 1 | 1 |
Alcaligenes faecalis | 1 | 1 | 1 |
Alcanivorax borkumensis SK2 | 2 | 1 | 2 |
Alcelaphine gammaherpesvirus 1 (wildebeest herpesvirus) | 3 | 3 | 3 |
Alfalfa dwarf virus | 1 | 1 | 1 |
Alfalfa mosaic virus | 4 | 4 | 1 |
Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 | 2 | 2 | 1 |
Aliivibrio fischeri | 1 | 1 | 1 |
Aliivibrio fischeri ES114 | 50 | 37 | 37 |
Aliivibrio fischeri MJ11 | 2 | 2 | 2 |
Alkalihalophilus pseudofirmus OF4 | 3 | 1 | 3 |
Alkalilimnicola ehrlichii MLHE-1 | 2 | 2 | 2 |
Alkaliphilus oremlandii OhILAs | 1 | 1 | 1 |
Alligator mississippiensis (American alligator) | 5 | 3 | 5 |
Alligator sinensis (Chinese alligator) | 10 | 6 | 10 |
Allochromatium vinosum DSM 180 | 5 | 3 | 5 |
Alphapapillomavirus 4 | 1 | 1 | 1 |
Alphapapillomavirus 7 | 108 | 88 | 7 |
Alternanthera mosaic virus | 2 | 2 | 2 |
Alternaria alternata | 3 | 2 | 3 |
Ambystoma tigrinum virus | 2 | 2 | 2 |
American grass carp reovirus | 4 | 4 | 4 |
Amsacta moorei entomopoxvirus | 3 | 3 | 2 |
Amycolatopsis mediterranei U32 | 4 | 4 | 3 |
Anabas testudineus (climbing perch) | 1 | 1 | 1 |
Anaerolinea thermophila UNI-1 | 1 | 1 | 1 |
Ananas comosus (pineapple) | 3 | 2 | 3 |
Anaplasma phagocytophilum str. HZ | 6 | 5 | 5 |
Anaplasma phagocytophilum str. JM | 1 | 1 | 1 |
Anas platyrhynchos (mallard) | 77 | 64 | 68 |
Anatid alphaherpesvirus 1 | 19 | 18 | 17 |
Andes orthohantavirus | 9 | 9 | 4 |
Anneissia japonica | 3 | 1 | 3 |
Anolis carolinensis (green anole) | 14 | 9 | 14 |
Anopheles albimanus | 1 | 1 | 1 |
Anopheles arabiensis | 1 | 1 | 1 |
Anopheles gambiae str. PEST | 105 | 85 | 76 |
Anopheles stephensi (Asian malaria mosquito) | 1 | 1 | 1 |
Anser cygnoides (Swan goose) | 28 | 22 | 27 |
Anticarsia gemmatalis nucleopolyhedrovirus | 1 | 1 | 1 |
Apis cerana (Asiatic honeybee) | 6 | 5 | 6 |
Apis mellifera (honey bee) | 191 | 143 | 131 |
Apis mellifera ligustica (common honey bee) | 1 | 1 | 1 |
Aplysia californica (California sea hare) | 17 | 15 | 13 |
Apple chlorotic leaf spot virus | 2 | 2 | 1 |
Apple geminivirus 1 | 3 | 1 | 3 |
Apple latent spherical virus | 1 | 1 | 1 |
Apple stem grooving virus | 1 | 1 | 1 |
Aquareovirus C | 1 | 1 | 1 |
Aquifex aeolicus VF5 | 44 | 41 | 34 |
Aquila chrysaetos canadensis | 1 | 1 | 1 |
Arabidopsis lyrata subsp. lyrata | 38 | 36 | 37 |
Arabidopsis thaliana (thale cress) | 23754 | 15726 | 7272 |
Arachis hypogaea (peanut) | 6 | 4 | 6 |
Arcanobacterium haemolyticum DSM 20595 | 1 | 1 | 1 |
Archaeoglobus fulgidus DSM 4304 | 45 | 43 | 40 |
Archaeoglobus fulgidus DSM 8774 | 1 | 1 | 1 |
Archaeoglobus veneficus SNP6 | 1 | 1 | 1 |
Argentinian mammarenavirus | 10 | 10 | 2 |
Aromatoleum aromaticum EbN1 | 2 | 1 | 2 |
Arthrobacter sp. Rue61a | 3 | 3 | 3 |
Artibeus jamaicensis (Jamaican fruit-eating bat) | 1 | 1 | 1 |
Asparagus officinalis (garden asparagus) | 2 | 1 | 2 |
Asparagus virus 2 | 1 | 1 | 1 |
Aspergillus aculeatinus CBS 121060 | 2 | 1 | 2 |
Aspergillus clavatus NRRL 1 | 3 | 2 | 3 |
Aspergillus fischeri NRRL 181 | 1 | 1 | 1 |
Aspergillus flavus NRRL3357 | 28 | 28 | 21 |
Aspergillus fumigatus Af293 | 184 | 153 | 131 |
Aspergillus nidulans FGSC A4 | 91 | 74 | 69 |
Aspergillus niger CBS 101883 | 2 | 2 | 2 |
Aspergillus niger CBS 513.88 | 30 | 27 | 23 |
Aspergillus oryzae RIB40 | 42 | 33 | 36 |
Aspergillus terreus NIH2624 | 1 | 1 | 1 |
Aspergillus thermomutatus | 2 | 2 | 2 |
Astyanax mexicanus (Mexican tetra) | 2 | 2 | 2 |
Athalia rosae (coleseed sawfly) | 3 | 1 | 3 |
Autographa californica nucleopolyhedrovirus | 102 | 91 | 46 |
Avian hepatitis E virus | 1 | 1 | 1 |
Avian leukemia virus | 1 | 1 | 1 |
Avian leukosis virus - RSA | 7 | 7 | 2 |
Avian metaavulavirus 5 | 1 | 1 | 1 |
Avian metapneumovirus | 9 | 9 | 4 |
Avian orthoavulavirus 1 | 6 | 6 | 4 |
Avian orthoreovirus | 6 | 5 | 3 |
Azoarcus sp. BH72 | 3 | 3 | 3 |
Azorhizobium caulinodans ORS 571 | 3 | 3 | 3 |
Azospirillum baldaniorum | 2 | 2 | 2 |
Azospirillum brasilense | 7 | 4 | 7 |
Azotobacter vinelandii DJ | 34 | 19 | 27 |
BK polyomavirus | 12 | 11 | 5 |
Babesia bovis T2Bo | 9 | 8 | 9 |
Babesia microti strain RI | 3 | 2 | 3 |
Bacillus amyloliquefaciens | 1 | 1 | 1 |
Bacillus amyloliquefaciens DSM 7 = ATCC 23350 | 2 | 2 | 2 |
Bacillus anthracis (anthrax bacterium) | 9 | 9 | 3 |
Bacillus anthracis str. 'Ames Ancestor' | 92 | 78 | 42 |
Bacillus anthracis str. A0248 | 6 | 5 | 5 |
Bacillus anthracis str. A2012 | 2 | 2 | 2 |
Bacillus anthracis str. Ames | 46 | 38 | 41 |
Bacillus anthracis str. CDC 684 | 1 | 1 | 1 |
Bacillus anthracis str. Sterne | 27 | 22 | 25 |
Bacillus cereus | 7 | 5 | 7 |
Bacillus cereus 03BB102 | 3 | 2 | 3 |
Bacillus cereus AH187 | 1 | 1 | 1 |
Bacillus cereus AH820 | 1 | 1 | 1 |
Bacillus cereus ATCC 10987 | 7 | 7 | 5 |
Bacillus cereus ATCC 14579 | 56 | 50 | 43 |
Bacillus cereus B4264 | 1 | 1 | 1 |
Bacillus cereus E33L | 17 | 16 | 15 |
Bacillus cereus F837/76 | 1 | 1 | 1 |
Bacillus cereus G9842 | 1 | 1 | 1 |
Bacillus cereus NC7401 | 1 | 1 | 1 |
Bacillus cereus biovar anthracis str. CI | 2 | 2 | 2 |
Bacillus cytotoxicus NVH 391-98 | 1 | 1 | 1 |
Bacillus licheniformis DSM 13 = ATCC 14580 | 26 | 26 | 18 |
Bacillus methanolicus MGA3 | 2 | 2 | 2 |
Bacillus mycoides | 2 | 2 | 2 |
Bacillus mycoides KBAB4 | 1 | 1 | 1 |
Bacillus phage GA1 | 1 | 1 | 1 |
Bacillus phage PZA | 7 | 6 | 6 |
Bacillus phage SPO1 | 1 | 1 | 1 |
Bacillus phage SPP1 | 1 | 1 | 1 |
Bacillus phage phi29 | 20 | 20 | 8 |
Bacillus pumilus SAFR-032 | 4 | 3 | 4 |
Bacillus subtilis | 29 | 24 | 27 |
Bacillus subtilis BEST7613 | 1 | 1 | 1 |
Bacillus subtilis BSn5 | 1 | 1 | 1 |
Bacillus subtilis PY79 | 9 | 6 | 9 |
Bacillus subtilis QB928 | 2 | 2 | 2 |
Bacillus subtilis XF-1 | 1 | 1 | 1 |
Bacillus subtilis subsp. natto | 1 | 1 | 1 |
Bacillus subtilis subsp. natto BEST195 | 2 | 2 | 2 |
Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499 | 3 | 3 | 3 |
Bacillus subtilis subsp. spizizenii TU-B-10 | 7 | 7 | 6 |
Bacillus subtilis subsp. spizizenii str. W23 | 9 | 9 | 9 |
Bacillus subtilis subsp. subtilis 6051-HGW | 1 | 1 | 1 |
Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10 | 2 | 2 | 2 |
Bacillus subtilis subsp. subtilis str. 168 | 1365 | 979 | 720 |
Bacillus subtilis subsp. subtilis str. RO-NN-1 | 3 | 3 | 3 |
Bacillus thuringiensis | 7 | 7 | 5 |
Bacillus thuringiensis BMB171 | 3 | 3 | 3 |
Bacillus thuringiensis Bt407 | 4 | 4 | 4 |
Bacillus thuringiensis MC28 | 1 | 1 | 1 |
Bacillus thuringiensis YBT-1518 | 1 | 1 | 1 |
Bacillus thuringiensis serovar berliner ATCC 10792 | 2 | 2 | 2 |
Bacillus thuringiensis serovar israelensis | 30 | 27 | 10 |
Bacillus thuringiensis serovar kurstaki str. HD73 | 3 | 2 | 3 |
Bacillus velezensis | 1 | 1 | 1 |
Bacillus velezensis FZB42 | 10 | 8 | 9 |
Bacillus velezensis YAU B9601-Y2 | 1 | 1 | 1 |
Bacteriophage P2 | 5 | 5 | 5 |
Bacteroides fragilis | 1 | 1 | 1 |
Bacteroides fragilis NCTC 9343 | 98 | 22 | 94 |
Bacteroides fragilis YCH46 | 5 | 5 | 4 |
Bacteroides helcogenes P 36-108 | 1 | 1 | 1 |
Bacteroides thetaiotaomicron | 5 | 4 | 5 |
Bacteroides thetaiotaomicron VPI-5482 | 17 | 16 | 17 |
Bactrocera dorsalis (oriental fruit fly) | 13 | 12 | 13 |
Bactrocera latifrons | 1 | 1 | 1 |
Bamaga virus | 1 | 1 | 1 |
Bamboo mosaic virus | 6 | 4 | 3 |
Banana bract mosaic virus | 1 | 1 | 1 |
Banana streak virus Acuminata Yunnan | 1 | 1 | 1 |
Banna virus strain JKT-6423 | 1 | 1 | 1 |
Barley stripe mosaic virus | 2 | 2 | 1 |
Barley yellow dwarf virus PAV | 1 | 1 | 1 |
Barley yellow mosaic virus | 1 | 1 | 1 |
Bartonella henselae str. Houston-1 | 11 | 7 | 11 |
Bartonella quintana RM-11 | 1 | 1 | 1 |
Bartonella quintana str. Toulouse | 3 | 1 | 3 |
Bat SARS CoV Rp3/2004 | 1 | 1 | 1 |
Bat SARS coronavirus HKU3 | 1 | 1 | 1 |
Bdellovibrio bacteriovorus HD100 | 17 | 8 | 17 |
Beak and feather disease virus | 1 | 1 | 1 |
Bean dwarf mosaic virus | 1 | 1 | 1 |
Bean pod mottle virus | 2 | 2 | 1 |
Beauveria bassiana ARSEF 2860 | 23 | 18 | 23 |
Beet black scorch virus | 1 | 1 | 1 |
Beet curly top virus | 4 | 4 | 2 |
Beet necrotic yellow vein virus | 4 | 4 | 2 |
Beet yellows virus | 2 | 2 | 1 |
Beilong virus | 1 | 1 | 1 |
Bemisia tabaci (sweet potato whitefly) | 3 | 3 | 3 |
Beta vulgaris subsp. vulgaris (field beet) | 10 | 8 | 10 |
Betapolyomavirus hominis | 2 | 2 | 1 |
Betapolyomavirus macacae | 5 | 5 | 3 |
Betapolyomavirus secumuris | 1 | 1 | 1 |
Bhendi yellow vein betasatellite | 1 | 1 | 1 |
Bhendi yellow vein mosaic virus | 3 | 3 | 2 |
Bifidobacterium adolescentis ATCC 15703 | 7 | 7 | 4 |
Bifidobacterium bifidum PRL2010 | 4 | 4 | 4 |
Bifidobacterium breve UCC2003 | 3 | 1 | 3 |
Bifidobacterium longum NCC2705 | 5 | 4 | 5 |
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 | 2 | 1 | 2 |
Bifidobacterium longum subsp. longum JCM 1217 | 1 | 1 | 1 |
Biomphalaria glabrata (bloodfluke planorb) | 2 | 2 | 2 |
Bison bison bison | 3 | 2 | 3 |
Blackcurrant reversion virus | 1 | 1 | 1 |
Blattella germanica densovirus 1 | 1 | 1 | 1 |
Bluetongue virus | 19 | 18 | 10 |
Boleophthalmus pectinirostris (great blue-spotted mudskipper) | 3 | 2 | 3 |
Bombus terrestris (buff-tailed bumblebee) | 6 | 4 | 6 |
Bombyx mandarina nucleopolyhedrovirus | 2 | 1 | 2 |
Bombyx mori (domestic silkworm) | 617 | 484 | 405 |
Bombyx mori nucleopolyhedrovirus | 67 | 61 | 46 |
Border disease virus | 2 | 2 | 1 |
Bordetella avium 197N | 2 | 1 | 2 |
Bordetella bronchiseptica | 3 | 1 | 3 |
Bordetella bronchiseptica RB50 | 25 | 18 | 22 |
Bordetella parapertussis 12822 | 2 | 1 | 2 |
Bordetella pertussis | 3 | 3 | 3 |
Bordetella pertussis 18323 | 8 | 8 | 5 |
Bordetella pertussis Tohama I | 62 | 54 | 30 |
Bordetella petrii DSM 12804 | 1 | 1 | 1 |
Borrelia garinii subsp. bavariensis PBi | 2 | 2 | 1 |
Borrelia hermsii | 1 | 1 | 1 |
Borrelia miyamotoi | 1 | 1 | 1 |
Borrelia turicatae 91E135 | 1 | 1 | 1 |
Borreliella afzelii ACA-1 | 1 | 1 | 1 |
Borreliella afzelii PKo | 2 | 2 | 2 |
Borreliella bissettii DN127 | 1 | 1 | 1 |
Borreliella burgdorferi (Lyme disease spirochete) | 7 | 7 | 2 |
Borreliella burgdorferi 118a | 1 | 1 | 1 |
Borreliella burgdorferi 156a | 2 | 2 | 2 |
Borreliella burgdorferi 297 | 7 | 6 | 4 |
Borreliella burgdorferi 64b | 2 | 2 | 1 |
Borreliella burgdorferi B31 | 204 | 161 | 96 |
Borreliella burgdorferi Bol26 | 3 | 3 | 3 |
Borreliella burgdorferi ZS7 | 6 | 4 | 6 |
Bos indicus (zebu cattle) | 10 | 10 | 10 |
Bos indicus x Bos taurus (hybrid cattle) | 1 | 1 | 1 |
Bos mutus (wild yak) | 12 | 10 | 12 |
Bos taurus (cattle) | 7241 | 5397 | 2403 |
Bos taurus papillomavirus 7 | 2 | 2 | 1 |
Botrytis cinerea B05.10 | 13 | 12 | 13 |
Bovine adenovirus 3 | 9 | 7 | 7 |
Bovine alphaherpesvirus 1 | 51 | 44 | 13 |
Bovine alphaherpesvirus 5 | 3 | 3 | 2 |
Bovine coronavirus | 7 | 5 | 5 |
Bovine ephemeral fever virus | 3 | 2 | 3 |
Bovine foamy virus | 2 | 1 | 2 |
Bovine gammaherpesvirus 4 | 2 | 2 | 2 |
Bovine immunodeficiency virus | 5 | 5 | 4 |
Bovine leukemia virus | 6 | 6 | 3 |
Bovine orthopneumovirus | 2 | 2 | 2 |
Bovine papular stomatitis virus | 2 | 2 | 2 |
Bovine respirovirus 3 | 1 | 1 | 1 |
Bovine viral diarrhea virus 1 | 16 | 16 | 1 |
Bovine viral diarrhea virus 2 (BVDV-2) | 1 | 1 | 1 |
Brachypodium distachyon (stiff brome) | 15 | 15 | 14 |
Brachyspira hyodysenteriae WA1 | 2 | 1 | 2 |
Bracoviriform demolitoris | 3 | 3 | 2 |
Bradyrhizobium diazoefficiens | 1 | 1 | 1 |
Bradyrhizobium diazoefficiens USDA 110 | 62 | 44 | 47 |
Bradyrhizobium japonicum USDA 6 | 8 | 6 | 7 |
Bradyrhizobium sp. | 1 | 1 | 1 |
Bradyrhizobium sp. BTAi1 | 1 | 1 | 1 |
Bradyrhizobium sp. ORS 278 | 3 | 2 | 3 |
Branchiostoma belcheri (Belcher's lancelet) | 1 | 1 | 1 |
Branchiostoma floridae (Florida lancelet) | 3 | 3 | 2 |
Brassica napus (rape) | 46 | 39 | 44 |
Brassica oleracea (wild cabbage) | 11 | 11 | 11 |
Brassica rapa (field mustard) | 35 | 32 | 30 |
Brevibacillus brevis NBRC 100599 | 1 | 1 | 1 |
Brome mosaic virus | 11 | 9 | 4 |
Brucella abortus 2308 | 48 | 31 | 43 |
Brucella abortus bv. 1 str. 9-941 | 12 | 10 | 10 |
Brucella melitensis ATCC 23457 | 2 | 1 | 2 |
Brucella melitensis M28 | 1 | 1 | 1 |
Brucella melitensis M5-90 | 1 | 1 | 1 |
Brucella melitensis NI | 1 | 1 | 1 |
Brucella melitensis bv. 1 str. 16M | 19 | 17 | 15 |
Brucella microti CCM 4915 | 1 | 1 | 1 |
Brucella ovis ATCC 25840 | 1 | 1 | 1 |
Brucella suis 1330 | 18 | 11 | 15 |
Brugia malayi (agent of lymphatic filariasis) | 14 | 14 | 13 |
Bruynoghevirus LUZ24 | 1 | 1 | 1 |
Bubalus bubalis (water buffalo) | 83 | 67 | 73 |
Bunyamwera virus | 7 | 7 | 3 |
Burkholderia ambifaria AMMD | 1 | 1 | 1 |
Burkholderia cenocepacia | 1 | 1 | 1 |
Burkholderia cenocepacia AU 1054 | 2 | 2 | 2 |
Burkholderia cenocepacia J2315 | 21 | 15 | 19 |
Burkholderia cenocepacia MC0-3 | 1 | 1 | 1 |
Burkholderia cepacia | 3 | 2 | 3 |
Burkholderia gladioli | 1 | 1 | 1 |
Burkholderia gladioli BSR3 | 1 | 1 | 1 |
Burkholderia glumae | 1 | 1 | 1 |
Burkholderia glumae BGR1 | 1 | 1 | 1 |
Burkholderia mallei | 2 | 2 | 2 |
Burkholderia mallei ATCC 23344 | 7 | 6 | 7 |
Burkholderia multivorans ATCC 17616 | 5 | 4 | 4 |
Burkholderia pseudomallei | 2 | 2 | 2 |
Burkholderia pseudomallei 1026b | 1 | 1 | 1 |
Burkholderia pseudomallei 1710b | 9 | 9 | 9 |
Burkholderia pseudomallei 406e | 1 | 1 | 1 |
Burkholderia pseudomallei K96243 | 52 | 48 | 43 |
Burkholderia pseudomallei MSHR2543 | 2 | 1 | 2 |
Burkholderia pseudomallei MSHR346 | 2 | 2 | 2 |
Burkholderia thailandensis | 1 | 1 | 1 |
Burkholderia thailandensis E264 | 8 | 7 | 8 |
Butyrivibrio proteoclasticus B316 | 1 | 1 | 1 |
Cabbage leaf curl virus | 3 | 3 | 1 |
Caenorhabditis briggsae | 3 | 3 | 3 |
Caenorhabditis elegans (roundworm) | 6979 | 4804 | 2672 |
Caenorhabditis remanei | 3 | 3 | 3 |
Caldanaerobacter subterraneus subsp. tengcongensis MB4 | 25 | 23 | 23 |
Caldicellulosiruptor bescii DSM 6725 | 2 | 2 | 2 |
Caldicellulosiruptor saccharolyticus DSM 8903 | 4 | 3 | 4 |
Caldivirga maquilingensis IC-167 | 1 | 1 | 1 |
Calicivirus isolate TCG | 1 | 1 | 1 |
Callithrix jacchus (white-tufted-ear marmoset) | 28 | 24 | 27 |
Callorhinchus milii (elephant shark) | 1 | 1 | 1 |
Camelina sativa (false flax) | 3 | 2 | 3 |
Camellia sinensis (black tea) | 17 | 10 | 17 |
Camelus bactrianus (Bactrian camel) | 2 | 2 | 2 |
Camelus dromedarius (Arabian camel) | 12 | 10 | 12 |
Camponotus floridanus (Florida carpenter ant) | 1 | 1 | 1 |
Campylobacter coli | 1 | 1 | 1 |
Campylobacter coli CVM N29710 | 1 | 1 | 1 |
Campylobacter jejuni 4031 | 3 | 1 | 3 |
Campylobacter jejuni RM1221 | 4 | 4 | 4 |
Campylobacter jejuni subsp. jejuni 00-2425 | 1 | 1 | 1 |
Campylobacter jejuni subsp. jejuni 81-176 | 25 | 21 | 24 |
Campylobacter jejuni subsp. jejuni 81116 | 6 | 5 | 6 |
Campylobacter jejuni subsp. jejuni IA3902 | 1 | 1 | 1 |
Campylobacter jejuni subsp. jejuni ICDCCJ07001 | 1 | 1 | 1 |
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 | 151 | 119 | 116 |
Campylobacter lari RM2100 | 8 | 8 | 5 |
Campylobacter phage NCTC12673 | 1 | 1 | 1 |
Candida albicans SC5314 | 767 | 584 | 449 |
Candida dubliniensis CD36 | 6 | 5 | 6 |
Candida orthopsilosis Co 90-125 | 2 | 2 | 2 |
Candida parapsilosis | 2 | 2 | 2 |
Candida tropicalis MYA-3404 | 3 | 2 | 3 |
Candidatus Pelagibacter ubique HTCC1062 | 1 | 1 | 1 |
Candidatus Protochlamydia amoebophila UWE25 | 1 | 1 | 1 |
Canine bocavirus 1 | 1 | 1 | 1 |
Canine minute virus | 3 | 3 | 1 |
Canine morbillivirus | 20 | 18 | 5 |
Canine parvovirus | 6 | 6 | 2 |
Canis lupus dingo (dingo) | 2 | 2 | 2 |
Canis lupus familiaris (dog) | 3303 | 2429 | 1454 |
Capra hircus (goat) | 369 | 275 | 258 |
Caprine parainfluenza virus 3 | 1 | 1 | 1 |
Capsicum annuum | 18 | 14 | 18 |
Captovirus AFV1 | 3 | 3 | 3 |
Carassius auratus (goldfish) | 10 | 8 | 10 |
Carboxydothermus hydrogenoformans Z-2901 | 2 | 2 | 2 |
Carica papaya (papaya) | 7 | 6 | 7 |
Carlito syrichta (Philippine tarsier) | 3 | 3 | 3 |
Carnation Italian ringspot virus | 1 | 1 | 1 |
Cauliflower mosaic virus | 8 | 7 | 3 |
Caulobacter vibrioides CB15 | 98 | 60 | 65 |
Caulobacter vibrioides NA1000 | 93 | 67 | 66 |
Cavenderia fasciculata | 1 | 1 | 1 |
Cavia porcellus (domestic guinea pig) | 207 | 165 | 158 |
Caviid betaherpesvirus 2 | 13 | 6 | 8 |
Cedecea neteri | 1 | 1 | 1 |
Cellulomonas gilvus ATCC 13127 | 1 | 1 | 1 |
Cellulosimicrobium cellulans | 1 | 1 | 1 |
Cellvibrio japonicus Ueda107 | 2 | 2 | 2 |
Ceratitis capitata (Mediterranean fruit fly) | 2 | 2 | 2 |
Cercocebus atys (sooty mangabey) | 1 | 1 | 1 |
Cercopithecine alphaherpesvirus 9 (Simian varicella virus) | 5 | 4 | 4 |
Cereal yellow dwarf virus RPS | 2 | 2 | 2 |
Cereal yellow dwarf virus RPV | 2 | 2 | 1 |
Cereibacter sphaeroides 2.4.1 | 99 | 75 | 49 |
Cereibacter sphaeroides ATCC 17025 | 3 | 3 | 2 |
Cereibacter sphaeroides ATCC 17029 | 7 | 7 | 4 |
Cereibacter sphaeroides KD131 | 2 | 2 | 2 |
Chandipura virus | 2 | 2 | 2 |
Chelonia mydas (Green sea turtle) | 1 | 1 | 1 |
Chicken anemia virus | 22 | 22 | 1 |
Chikungunya virus | 56 | 55 | 2 |
Chili leaf curl betasatellite | 1 | 1 | 1 |
Chinchilla lanigera (long-tailed chinchilla) | 2 | 2 | 2 |
Chinese wheat mosaic virus | 4 | 3 | 4 |
Chlamydia abortus S26/3 | 2 | 2 | 2 |
Chlamydia muridarum str. Nigg | 8 | 7 | 6 |
Chlamydia pneumoniae AR39 | 12 | 10 | 9 |
Chlamydia pneumoniae CWL029 | 12 | 12 | 11 |
Chlamydia pneumoniae TW-183 | 6 | 6 | 5 |
Chlamydia psittaci 6BC | 2 | 2 | 2 |
Chlamydia trachomatis | 4 | 4 | 1 |
Chlamydia trachomatis 434/Bu | 16 | 11 | 16 |
Chlamydia trachomatis A/HAR-13 | 5 | 5 | 4 |
Chlamydia trachomatis B/Jali20/OT | 1 | 1 | 1 |
Chlamydia trachomatis B/TZ1A828/OT | 3 | 2 | 3 |
Chlamydia trachomatis D/UW-3/CX | 45 | 41 | 34 |
Chlamydia trachomatis L1/440/LN | 1 | 1 | 1 |
Chlamydia trachomatis L2b/UCH-1/proctitis | 5 | 5 | 4 |
Chlamydia trachomatis L2c | 3 | 3 | 3 |
Chlamydomonas reinhardtii | 382 | 303 | 247 |
Chlorobaculum tepidum TLS | 38 | 26 | 32 |
Chlorocebus sabaeus (green monkey) | 47 | 32 | 45 |
Chloroherpeton thalassium ATCC 35110 | 1 | 1 | 1 |
Choristoneura fumiferana DEF multiple nucleopolyhedrovirus | 1 | 1 | 1 |
Chromobacterium violaceum | 1 | 1 | 1 |
Chromobacterium violaceum ATCC 12472 | 6 | 4 | 6 |
Chromohalobacter salexigens DSM 3043 | 1 | 1 | 1 |
Chrysemys picta (Painted turtle) | 2 | 2 | 2 |
Chrysodeixis chalcites nucleopolyhedrovirus | 1 | 1 | 1 |
Cicer arietinum (chickpea) | 18 | 14 | 18 |
Cimex lectularius (bed bug) | 2 | 2 | 2 |
Ciona intestinalis (vase tunicate) | 138 | 109 | 82 |
Citrifermentans bemidjiense Bem | 1 | 1 | 1 |
Citrobacter freundii | 3 | 2 | 2 |
Citrobacter freundii CFNIH1 | 3 | 3 | 2 |
Citrobacter koseri ATCC BAA-895 | 1 | 1 | 1 |
Citrobacter rodentium ICC168 | 2 | 2 | 2 |
Citrus leaf blotch virus | 1 | 1 | 1 |
Citrus psorosis virus | 2 | 1 | 2 |
Citrus sinensis (sweet orange) | 11 | 11 | 11 |
Citrus tristeza virus | 17 | 12 | 7 |
Classical swine fever virus | 71 | 71 | 1 |
Clavibacter michiganensis subsp. michiganensis NCPPB 382 | 2 | 1 | 2 |
Clavispora lusitaniae ATCC 42720 | 1 | 1 | 1 |
Clostridioides difficile | 28 | 26 | 21 |
Clostridioides difficile 630 | 100 | 76 | 43 |
Clostridioides difficile CD196 | 2 | 2 | 2 |
Clostridioides difficile R20291 | 7 | 6 | 6 |
Clostridium acetobutylicum ATCC 824 | 45 | 29 | 36 |
Clostridium acetobutylicum DSM 1731 | 1 | 1 | 1 |
Clostridium beijerinckii | 1 | 1 | 1 |
Clostridium beijerinckii NCIMB 8052 | 1 | 1 | 1 |
Clostridium botulinum | 2 | 2 | 1 |
Clostridium botulinum A str. ATCC 19397 | 1 | 1 | 1 |
Clostridium botulinum A str. ATCC 3502 | 39 | 31 | 19 |
Clostridium botulinum A str. Hall | 2 | 2 | 1 |
Clostridium botulinum B str. Eklund 17B | 2 | 2 | 1 |
Clostridium botulinum B1 str. Okra | 2 | 2 | 1 |
Clostridium botulinum BKT015925 | 2 | 2 | 2 |
Clostridium botulinum Ba4 str. 657 | 2 | 2 | 1 |
Clostridium botulinum F str. Langeland | 1 | 1 | 1 |
Clostridium botulinum H04402 065 | 1 | 1 | 1 |
Clostridium cellulovorans 743B | 1 | 1 | 1 |
Clostridium kluyveri DSM 555 | 2 | 2 | 2 |
Clostridium novyi NT | 1 | 1 | 1 |
Clostridium pasteurianum BC1 | 1 | 1 | 1 |
Clostridium perfringens | 27 | 23 | 15 |
Clostridium perfringens ATCC 13124 | 13 | 13 | 10 |
Clostridium perfringens SM101 | 11 | 8 | 11 |
Clostridium perfringens str. 13 | 43 | 33 | 27 |
Clostridium tetani E88 | 5 | 5 | 4 |
Clover yellow vein virus | 2 | 1 | 2 |
Clupea harengus (Atlantic herring) | 3 | 3 | 3 |
Coccidioides immitis RS | 2 | 2 | 2 |
Coccomyxa subellipsoidea C-169 | 1 | 1 | 1 |
Cocksfoot mottle virus | 1 | 1 | 1 |
Colletotrichum fructicola | 1 | 1 | 1 |
Colletotrichum fructicola Nara gc5 | 1 | 1 | 1 |
Colossoma macropomum (tambaqui) | 2 | 1 | 2 |
Columba livia (rock pigeon) | 27 | 22 | 25 |
Colwellia psychrerythraea 34H | 2 | 2 | 2 |
Comamonas testosteroni | 1 | 1 | 1 |
Comamonas testosteroni TK102 | 4 | 4 | 4 |
Condylura cristata (star-nosed mole) | 1 | 1 | 1 |
Coprinopsis cinerea okayama7#130 | 11 | 10 | 11 |
Cordyceps militaris CM01 | 1 | 1 | 1 |
Corynebacterium aurimucosum ATCC 700975 | 1 | 1 | 1 |
Corynebacterium diphtheriae | 4 | 4 | 3 |
Corynebacterium diphtheriae C7 (beta) | 2 | 1 | 2 |
Corynebacterium diphtheriae NCTC 13129 | 22 | 19 | 11 |
Corynebacterium glutamicum | 7 | 7 | 5 |
Corynebacterium glutamicum ATCC 13032 | 201 | 149 | 161 |
Corynebacterium glutamicum MB001 | 3 | 3 | 3 |
Corynebacterium glutamicum R | 14 | 10 | 14 |
Corynebacterium glutamicum SCgG2 | 1 | 1 | 1 |
Corynebacterium jeikeium | 1 | 1 | 1 |
Corynebacterium jeikeium K411 | 3 | 2 | 3 |
Corynebacterium phage BFK20 | 2 | 2 | 2 |
Corynebacterium pseudotuberculosis 31 | 1 | 1 | 1 |
Corynebacterium pseudotuberculosis C231 | 1 | 1 | 1 |
Cotton leaf curl Multan betasatellite | 1 | 1 | 1 |
Cotton leafroll dwarf virus | 1 | 1 | 1 |
Coturnix japonica (Japanese quail) | 34 | 25 | 27 |
Cowpea chlorotic mottle virus | 1 | 1 | 1 |
Cowpea mosaic virus | 1 | 1 | 1 |
Cowpox virus | 11 | 11 | 7 |
Coxiella burnetii RSA 493 | 15 | 12 | 15 |
Coxsackievirus B3 | 3 | 3 | 1 |
Crassostrea gigas (Pacific oyster) | 30 | 27 | 28 |
Cricetulus griseus (Chinese hamster) | 90 | 73 | 82 |
Crimean-Congo hemorrhagic fever orthonairovirus | 7 | 7 | 3 |
Crocosphaera subtropica ATCC 51142 | 2 | 1 | 2 |
Cronobacter sakazakii | 9 | 8 | 8 |
Cronobacter sakazakii ATCC BAA-894 | 3 | 3 | 3 |
Cryptococcus gattii WM276 | 3 | 3 | 3 |
Cryptococcus neoformans var. grubii H99 | 25 | 22 | 24 |
Cryptococcus neoformans var. neoformans B-3501A | 2 | 2 | 2 |
Cryptococcus neoformans var. neoformans JEC21 | 34 | 32 | 24 |
Cryptomeria japonica (Japanese cedar) | 1 | 1 | 1 |
Cryptosporidium hominis TU502 | 1 | 1 | 1 |
Cryptosporidium parvum Iowa II | 26 | 25 | 24 |
Ctenoptilum vasava (tawny angle) | 1 | 1 | 1 |
Cucumber mosaic virus (cucumber mosaic cucumovirus) | 25 | 23 | 5 |
Cucumber necrosis virus | 5 | 5 | 2 |
Cucumber vein yellowing virus | 3 | 3 | 1 |
Cucumis melo (muskmelon) | 7 | 6 | 7 |
Cucumis sativus (cucumber) | 42 | 39 | 40 |
Cucurbit chlorotic yellows virus | 1 | 1 | 1 |
Cucurbit yellow stunting disorder virus | 1 | 1 | 1 |
Cucurbita maxima (winter squash) | 2 | 2 | 2 |
Cucurbita moschata (crookneck pumpkin) | 1 | 1 | 1 |
Culex quinquefasciatus (southern house mosquito) | 23 | 18 | 21 |
Cupriavidus metallidurans CH34 | 21 | 20 | 17 |
Cupriavidus necator H16 | 51 | 35 | 41 |
Cupriavidus necator N-1 | 2 | 2 | 2 |
Cutibacterium acnes KPA171202 | 4 | 4 | 4 |
Cyanidioschyzon merolae strain 10D | 2 | 2 | 2 |
Cymbidium mosaic virus | 1 | 1 | 1 |
Cymbidium ringspot virus | 1 | 1 | 1 |
Cynoglossus semilaevis (tongue sole) | 27 | 23 | 26 |
Cypovirus 1 | 2 | 2 | 2 |
Cyprinid herpesvirus 3 | 8 | 8 | 7 |
Cyprinodon variegatus (sheepshead minnow) | 1 | 1 | 1 |
Cyprinus carpio (common carp) | 22 | 19 | 22 |
Cytophaga hutchinsonii ATCC 33406 | 2 | 2 | 2 |
Danio rerio (zebrafish) | 9537 | 6800 | 4172 |
Daphnia magna | 3 | 3 | 3 |
Daucus carota subsp. sativus | 10 | 6 | 10 |
Debaryomyces hansenii CBS767 | 2 | 2 | 2 |
Dechloromonas aromatica RCB | 1 | 1 | 1 |
Dehalococcoides mccartyi CBDB1 | 1 | 1 | 1 |
Deinococcus deserti VCD115 | 3 | 2 | 3 |
Deinococcus geothermalis DSM 11300 | 7 | 7 | 6 |
Deinococcus radiodurans | 2 | 2 | 2 |
Deinococcus radiodurans R1 | 110 | 91 | 83 |
Deltapapillomavirus 4 | 39 | 34 | 6 |
Dendroctonus ponderosae (mountain pine beetle) | 1 | 1 | 1 |
Dendrolimus punctatus cypovirus 22 | 1 | 1 | 1 |
Dendrolimus punctatus virus | 1 | 1 | 1 |
Dengue virus 1 | 36 | 36 | 1 |
Dengue virus 2 | 109 | 109 | 1 |
Dengue virus 3 | 15 | 15 | 1 |
Dengue virus 4 | 9 | 9 | 1 |
Denitrovibrio acetiphilus DSM 12809 | 1 | 1 | 1 |
Desmodus rotundus (common vampire bat) | 3 | 3 | 3 |
Desulfitobacterium hafniense DCB-2 | 2 | 2 | 2 |
Desulfitobacterium hafniense Y51 | 1 | 1 | 1 |
Desulfovibrio desulfuricans ATCC 27774 | 1 | 1 | 1 |
Desulfovibrio vulgaris DP4 | 1 | 1 | 1 |
Desulfovibrio vulgaris str. 'Miyazaki F' | 1 | 1 | 1 |
Desulfovibrio vulgaris str. Hildenborough | 35 | 26 | 31 |
Desulfurococcus amylolyticus 1221n | 1 | 1 | 1 |
Diaphorina citri (Asian citrus psyllid) | 2 | 2 | 2 |
Dichelobacter nodosus VCS1703A | 7 | 5 | 7 |
Dickeya dadantii 3937 | 10 | 8 | 10 |
Dickeya solani | 1 | 1 | 1 |
Dictyostelium discoideum AX4 | 297 | 248 | 231 |
Dromaius novaehollandiae (emu) | 2 | 1 | 2 |
Drosophila albomicans | 1 | 1 | 1 |
Drosophila ananassae | 2 | 2 | 2 |
Drosophila erecta | 2 | 2 | 2 |
Drosophila ficusphila | 2 | 2 | 2 |
Drosophila grimshawi | 2 | 2 | 2 |
Drosophila hydei | 4 | 4 | 4 |
Drosophila melanogaster (fruit fly) | 20647 | 14117 | 4170 |
Drosophila mojavensis | 5 | 5 | 4 |
Drosophila navojoa | 2 | 2 | 2 |
Drosophila novamexicana | 1 | 1 | 1 |
Drosophila persimilis | 1 | 1 | 1 |
Drosophila pseudoobscura | 3 | 3 | 3 |
Drosophila sechellia | 2 | 2 | 2 |
Drosophila simulans | 6 | 6 | 5 |
Drosophila suzukii | 1 | 1 | 1 |
Drosophila takahashii | 1 | 1 | 1 |
Drosophila virilis | 22 | 21 | 22 |
Drosophila willistoni | 1 | 1 | 1 |
Drosophila yakuba | 2 | 2 | 2 |
Dubowvirus dv11 | 2 | 2 | 1 |
Duck circovirus | 2 | 2 | 2 |
Duck hepatitis A virus 1 | 1 | 1 | 1 |
Duck hepatitis A virus 3 | 1 | 1 | 1 |
Duck hepatitis B virus | 4 | 4 | 2 |
East African cassava mosaic Cameroon virus | 2 | 2 | 2 |
East African cassava mosaic Zanzibar virus | 1 | 1 | 1 |
Eastern equine encephalitis virus | 2 | 2 | 1 |
Echinococcus granulosus | 9 | 8 | 9 |
Echinops telfairi (small Madagascar hedgehog) | 2 | 2 | 2 |
Ectocarpus siliculosus virus 1 | 1 | 1 | 1 |
Ectromelia virus | 4 | 3 | 3 |
Ectropis obliqua picorna-like virus | 1 | 1 | 1 |
Edwardsiella anguillarum ET080813 | 1 | 1 | 1 |
Edwardsiella ictaluri | 3 | 1 | 3 |
Edwardsiella ictaluri 93-146 | 4 | 2 | 4 |
Edwardsiella piscicida | 3 | 3 | 2 |
Edwardsiella tarda EIB202 | 12 | 10 | 12 |
Ehrlichia chaffeensis str. Arkansas | 1 | 1 | 1 |
Ehrlichia ruminantium str. Welgevonden | 2 | 2 | 2 |
Eimeria acervulina | 1 | 1 | 1 |
Eimeria maxima | 1 | 1 | 1 |
Eimeria tenella | 4 | 4 | 3 |
Elaeis guineensis (African oil palm) | 1 | 1 | 1 |
Electrophorus electricus (electric eel) | 1 | 1 | 1 |
Elizabethkingia anophelis | 1 | 1 | 1 |
Emiliania huxleyi CCMP1516 | 3 | 2 | 3 |
Emiliania huxleyi virus 86 | 1 | 1 | 1 |
Encephalitozoon cuniculi GB-M1 | 9 | 9 | 8 |
Encephalomyocarditis virus | 14 | 14 | 1 |
Entamoeba histolytica HM-1:IMSS | 76 | 66 | 69 |
Entamoeba invadens IP1 | 5 | 3 | 5 |
Enterobacter cloacae | 9 | 8 | 7 |
Enterobacter cloacae subsp. cloacae | 2 | 2 | 2 |
Enterobacter cloacae subsp. cloacae ATCC 13047 | 11 | 7 | 9 |
Enterobacteria phage P4 | 5 | 4 | 4 |
Enterobacteria phage PRD1 | 2 | 1 | 2 |
Enterobacteria phage T3 | 1 | 1 | 1 |
Enterobacteria phage phi92 | 1 | 1 | 1 |
Enterobacteria phage phiP27 | 1 | 1 | 1 |
Enterocloster bolteae 90A9 | 1 | 1 | 1 |
Enterococcus faecalis | 46 | 37 | 32 |
Enterococcus faecalis 62 | 6 | 5 | 5 |
Enterococcus faecalis EnGen0107 | 1 | 1 | 1 |
Enterococcus faecalis EnGen0336 | 1 | 1 | 1 |
Enterococcus faecalis OG1RF | 4 | 4 | 3 |
Enterococcus faecalis V583 | 51 | 41 | 43 |
Enterococcus faecium | 20 | 16 | 13 |
Enterococcus faecium ATCC 8459 = NRRL B-2354 | 1 | 1 | 1 |
Enterococcus faecium DO | 6 | 6 | 6 |
Enterococcus gallinarum | 1 | 1 | 1 |
Enterococcus hirae ATCC 9790 | 2 | 2 | 2 |
Enterococcus phage BC611 | 2 | 2 | 2 |
Enterovirus A | 44 | 44 | 1 |
Enterovirus B | 6 | 6 | 1 |
Enterovirus C | 29 | 29 | 1 |
Enterovirus D | 5 | 5 | 1 |
Enzootic nasal tumour virus of goats | 1 | 1 | 1 |
Epiphyas postvittana nucleopolyhedrovirus | 1 | 1 | 1 |
Eptesicus fuscus (big brown bat) | 2 | 2 | 2 |
Equid alphaherpesvirus 1 (Equine herpesvirus 1) | 31 | 28 | 19 |
Equid alphaherpesvirus 4 (Equine herpesvirus 4) | 6 | 6 | 6 |
Equine arteritis virus | 8 | 8 | 3 |
Equine hepacivirus JPN3/JAPAN/2013 | 1 | 1 | 1 |
Equine infectious anemia virus | 7 | 7 | 2 |
Equus asinus (ass) | 16 | 14 | 15 |
Equus caballus (horse) | 778 | 587 | 408 |
Equus przewalskii (Przewalski's horse) | 1 | 1 | 1 |
Eremothecium gossypii ATCC 10895 | 17 | 13 | 17 |
Erinaceus europaeus (western European hedgehog) | 1 | 1 | 1 |
Erwinia amylovora ATCC 49946 | 5 | 4 | 5 |
Erwinia amylovora CFBP1430 | 14 | 13 | 7 |
Erythrobacter litoralis HTCC2594 | 1 | 1 | 1 |
Escherichia coli (E. coli) | 347 | 311 | 182 |
Escherichia coli 'BL21-Gold(DE3)pLysS AG' | 15 | 15 | 14 |
Escherichia coli 042 | 5 | 3 | 4 |
Escherichia coli 536 | 2 | 2 | 2 |
Escherichia coli ABU 83972 | 1 | 1 | 1 |
Escherichia coli APEC O1 | 15 | 14 | 15 |
Escherichia coli ATCC 8739 | 1 | 1 | 1 |
Escherichia coli B str. REL606 | 4 | 2 | 4 |
Escherichia coli B171 | 2 | 2 | 2 |
Escherichia coli BL21(DE3) | 75 | 50 | 71 |
Escherichia coli BW2952 | 11 | 11 | 11 |
Escherichia coli CFT073 | 105 | 95 | 90 |
Escherichia coli ED1a | 1 | 1 | 1 |
Escherichia coli ETEC 1392/75 | 1 | 1 | 1 |
Escherichia coli ETEC H10407 | 5 | 5 | 3 |
Escherichia coli F18+ | 1 | 1 | 1 |
Escherichia coli HS | 11 | 10 | 10 |
Escherichia coli IAI1 | 1 | 1 | 1 |
Escherichia coli IAI39 | 6 | 6 | 6 |
Escherichia coli IHE3034 | 4 | 2 | 4 |
Escherichia coli K-12 | 14 | 12 | 13 |
Escherichia coli LF82 | 4 | 4 | 4 |
Escherichia coli O103:H2 str. 12009 | 5 | 4 | 4 |
Escherichia coli O104:H4 str. 2011C-3493 | 8 | 7 | 8 |
Escherichia coli O111:H- str. 11128 | 6 | 5 | 6 |
Escherichia coli O127:H6 str. E2348/69 | 34 | 25 | 27 |
Escherichia coli O139:H28 str. E24377A | 7 | 7 | 7 |
Escherichia coli O157:H7 | 1 | 1 | 1 |
Escherichia coli O157:H7 str. EC4115 | 7 | 4 | 7 |
Escherichia coli O157:H7 str. EDL933 | 91 | 77 | 67 |
Escherichia coli O157:H7 str. Sakai | 114 | 93 | 81 |
Escherichia coli O157:H7 str. TW14359 | 16 | 12 | 15 |
Escherichia coli O18:H1 | 1 | 1 | 1 |
Escherichia coli O25b:H4-ST131 | 1 | 1 | 1 |
Escherichia coli O26:H11 str. 11368 | 4 | 2 | 3 |
Escherichia coli O55:H7 str. CB9615 | 2 | 2 | 2 |
Escherichia coli O7:K1 str. CE10 | 1 | 1 | 1 |
Escherichia coli O83:H1 str. NRG 857C | 1 | 1 | 1 |
Escherichia coli PMV-1 | 1 | 1 | 1 |
Escherichia coli S88 | 2 | 2 | 2 |
Escherichia coli SMS-3-5 | 2 | 2 | 2 |
Escherichia coli UMN026 | 10 | 8 | 10 |
Escherichia coli UTI89 | 30 | 28 | 23 |
Escherichia coli W | 2 | 2 | 2 |
Escherichia coli str. K-12 substr. DH10B | 239 | 202 | 181 |
Escherichia coli str. K-12 substr. MG1655 | 9365 | 6896 | 2110 |
Escherichia coli str. K-12 substr. W3110 | 142 | 109 | 126 |
Escherichia phage 186 | 1 | 1 | 1 |
Escherichia phage 933W | 4 | 4 | 3 |
Escherichia phage Cba120 | 1 | 1 | 1 |
Escherichia phage HK022 | 1 | 1 | 1 |
Escherichia phage HK97 | 7 | 7 | 5 |
Escherichia phage JS98 | 1 | 1 | 1 |
Escherichia phage MS2 | 5 | 5 | 2 |
Escherichia phage Mu | 8 | 7 | 6 |
Escherichia phage N15 | 5 | 5 | 4 |
Escherichia phage N4 | 3 | 3 | 3 |
Escherichia phage NJ01 | 1 | 1 | 1 |
Escherichia phage P1 | 14 | 12 | 7 |
Escherichia phage Qbeta | 8 | 8 | 2 |
Escherichia phage RB69 | 17 | 17 | 1 |
Escherichia phage T4 | 134 | 110 | 56 |
Escherichia phage T5 | 4 | 4 | 4 |
Escherichia phage T7 | 64 | 55 | 16 |
Escherichia phage phiX174 | 1 | 1 | 1 |
Escherichia phage vB_EcoP_24B | 1 | 1 | 1 |
Esox lucius (northern pike) | 3 | 3 | 3 |
Eucalyptus grandis (rose gum) | 4 | 2 | 4 |
Euglena gracilis | 2 | 1 | 2 |
Euglena longa | 1 | 1 | 1 |
Eutrema salsugineum (saltwater cress) | 2 | 2 | 2 |
Exiguobacterium sibiricum 255-15 | 2 | 2 | 2 |
Falco cherrug (Saker falcon) | 1 | 1 | 1 |
Fasciola hepatica (liver fluke) | 1 | 1 | 1 |
Feline calicivirus | 5 | 5 | 2 |
Feline coronavirus | 2 | 2 | 2 |
Feline foamy virus | 5 | 5 | 4 |
Feline immunodeficiency virus | 16 | 16 | 3 |
Feline infectious peritonitis virus (FIPV) | 9 | 8 | 6 |
Feline leukemia virus | 5 | 5 | 2 |
Felis catus (domestic cat) | 456 | 349 | 292 |
Fibrobacter succinogenes subsp. succinogenes S85 | 2 | 2 | 1 |
Ficedula albicollis (Collared flycatcher) | 3 | 3 | 2 |
Finegoldia magna ATCC 29328 | 1 | 1 | 1 |
Flavobacterium johnsoniae UW101 | 2 | 2 | 2 |
Flavobacterium psychrophilum JIP02/86 | 4 | 3 | 4 |
Flock House virus | 5 | 5 | 2 |
Fonsecaea monophora | 2 | 1 | 2 |
Foot and mouth disease virus C | 5 | 5 | 1 |
Foot-and-mouth disease virus A | 6 | 6 | 1 |
Foot-and-mouth disease virus Asia 1 | 3 | 3 | 1 |
Foot-and-mouth disease virus O | 20 | 20 | 2 |
Fopius arisanus | 1 | 1 | 1 |
Fowl aviadenovirus C | 2 | 2 | 2 |
Fowlpox virus | 6 | 5 | 5 |
Fragaria vesca (wild strawberry) | 10 | 9 | 9 |
Francisella tularensis | 1 | 1 | 1 |
Francisella tularensis subsp. holarctica LVS | 12 | 9 | 11 |
Francisella tularensis subsp. holarctica OSU18 | 2 | 2 | 2 |
Francisella tularensis subsp. mediasiatica FSC147 | 7 | 6 | 7 |
Francisella tularensis subsp. novicida FTG | 6 | 3 | 6 |
Francisella tularensis subsp. novicida U112 | 25 | 17 | 24 |
Francisella tularensis subsp. tularensis FSC198 | 1 | 1 | 1 |
Francisella tularensis subsp. tularensis SCHU S4 | 42 | 36 | 37 |
Frankia casuarinae | 2 | 1 | 2 |
Friend murine leukemia virus | 7 | 7 | 3 |
Frog virus 3 | 2 | 2 | 2 |
Fromanvirus L5 | 5 | 2 | 5 |
Fukomys damarensis (Damara mole-rat) | 1 | 1 | 1 |
Fundulus heteroclitus (mummichog) | 3 | 3 | 3 |
Fusarium fujikuroi IMI 58289 | 3 | 2 | 3 |
Fusarium graminearum PH-1 | 28 | 27 | 28 |
Fusarium oxysporum f. sp. lycopersici 4287 | 1 | 1 | 1 |
Fusarium vanettenii 77-13-4 | 1 | 1 | 1 |
Fusarium verticillioides 7600 | 3 | 3 | 3 |
Fusobacterium nucleatum | 1 | 1 | 1 |
Fusobacterium nucleatum subsp. nucleatum ATCC 25586 | 5 | 4 | 5 |
GB virus C | 4 | 4 | 1 |
GB virus-B | 4 | 4 | 1 |
Gadus morhua (Atlantic cod) | 1 | 1 | 1 |
Galdieria sulphuraria | 1 | 1 | 1 |
Galleria mellonella (greater wax moth) | 2 | 2 | 2 |
Galleria mellonella densovirus | 1 | 1 | 1 |
Gallibacterium anatis | 1 | 1 | 1 |
Gallid alphaherpesvirus 1 | 13 | 10 | 11 |
Gallid alphaherpesvirus 2 (Marek disease virus type 1) | 38 | 31 | 20 |
Gallid alphaherpesvirus 3 (Marek's disease virus type 2) | 4 | 3 | 4 |
Gallionella capsiferriformans ES-2 | 1 | 1 | 1 |
Gallus gallus (chicken) | 5636 | 3980 | 2372 |
Gardnerella vaginalis ATCC 14019 | 1 | 1 | 1 |
Garlic latent virus | 1 | 1 | 1 |
Gasterosteus aculeatus (three-spined stickleback) | 2 | 2 | 2 |
Gekko japonicus | 1 | 1 | 1 |
Geobacillus kaustophilus HTA426 | 18 | 14 | 17 |
Geobacillus stearothermophilus | 3 | 3 | 3 |
Geobacillus stearothermophilus 10 | 1 | 1 | 1 |
Geobacillus thermodenitrificans NG80-2 | 3 | 2 | 3 |
Geobacillus thermoleovorans | 1 | 1 | 1 |
Geobacillus virus E2 | 1 | 1 | 1 |
Geobacter metallireducens GS-15 | 2 | 2 | 2 |
Geobacter sulfurreducens KN400 | 3 | 2 | 3 |
Geobacter sulfurreducens PCA | 18 | 13 | 16 |
Geotalea uraniireducens Rf4 | 1 | 1 | 1 |
Giardia intestinalis | 57 | 50 | 49 |
Gibbon ape leukemia virus (GALV) | 1 | 1 | 1 |
Glaesserella parasuis | 2 | 2 | 2 |
Glaesserella parasuis SH0165 | 5 | 4 | 5 |
Glaesserella parasuis ZJ0906 | 1 | 1 | 1 |
Gloeobacter violaceus PCC 7421 | 7 | 7 | 4 |
Gluconacetobacter diazotrophicus PA1 5 | 1 | 1 | 1 |
Gluconobacter oxydans 621H | 17 | 11 | 17 |
Glycine max (soybean) | 573 | 456 | 445 |
Glycine soja (wild soybean) | 1 | 1 | 1 |
Goose adenovirus 4 | 1 | 1 | 1 |
Goose parvovirus | 1 | 1 | 1 |
Gorilla gorilla (western gorilla) | 3 | 3 | 3 |
Gossypium arboreum (tree cotton) | 1 | 1 | 1 |
Gossypium hirsutum (cotton) | 37 | 34 | 37 |
Gossypium raimondii | 2 | 2 | 2 |
Gottschalkia acidurici 9a | 1 | 1 | 1 |
Granulibacter bethesdensis CGDNIH1 | 1 | 1 | 1 |
Grapevine Algerian latent virus | 1 | 1 | 1 |
Grapevine fanleaf virus | 2 | 2 | 2 |
Grapevine virus A | 1 | 1 | 1 |
Grapevine virus B | 1 | 1 | 1 |
Grimontia hollisae | 1 | 1 | 1 |
Groundnut bud necrosis virus | 1 | 1 | 1 |
H-1 parvovirus | 1 | 1 | 1 |
Habenaria mosaic virus | 1 | 1 | 1 |
Haemophilus influenzae | 4 | 4 | 4 |
Haemophilus influenzae 86-028NP | 30 | 30 | 25 |
Haemophilus influenzae F3031 | 1 | 1 | 1 |
Haemophilus influenzae PittEE | 1 | 1 | 1 |
Haemophilus influenzae PittGG | 1 | 1 | 1 |
Haemophilus influenzae Rd KW20 | 60 | 52 | 50 |
Halalkalibacterium halodurans C-125 | 15 | 14 | 15 |
Haloarcula hispanica ATCC 33960 | 1 | 1 | 1 |
Haloarcula marismortui ATCC 43049 | 3 | 2 | 3 |
Halobacterium salinarum | 1 | 1 | 1 |
Halobacterium salinarum NRC-1 | 24 | 20 | 19 |
Halobacterium salinarum R1 | 24 | 21 | 10 |
Haloferax mediterranei ATCC 33500 | 8 | 4 | 8 |
Haloferax volcanii DS2 | 31 | 23 | 27 |
Halogeometricum borinquense | 2 | 1 | 2 |
Halomonas elongata DSM 2581 | 1 | 1 | 1 |
Haloquadratum walsbyi DSM 16790 | 2 | 2 | 2 |
Halorubrum lacusprofundi ATCC 49239 | 1 | 1 | 1 |
Halorubrum pleomorphic virus 1 | 2 | 1 | 2 |
Halothermothrix orenii H 168 | 2 | 2 | 2 |
Halothiobacillus neapolitanus c2 | 1 | 1 | 1 |
Hammondia hammondi | 2 | 1 | 2 |
Hantaan orthohantavirus | 13 | 12 | 2 |
Hantavirus Z10 | 1 | 1 | 1 |
Hapavirus wongabel | 1 | 1 | 1 |
Haplochromis burtoni (Burton's mouthbrooder) | 4 | 3 | 4 |
Hazara virus | 2 | 2 | 1 |
Heartland virus | 2 | 2 | 2 |
Helianthus annuus (common sunflower) | 7 | 5 | 7 |
Helicobacter acinonychis str. Sheeba | 2 | 1 | 2 |
Helicobacter hepaticus ATCC 51449 | 7 | 7 | 7 |
Helicobacter mustelae 12198 | 3 | 2 | 3 |
Helicobacter pullorum | 1 | 1 | 1 |
Helicobacter pylori | 31 | 27 | 20 |
Helicobacter pylori 2017 | 1 | 1 | 1 |
Helicobacter pylori 26695 | 285 | 239 | 171 |
Helicobacter pylori 51 | 2 | 2 | 2 |
Helicobacter pylori 52 | 1 | 1 | 1 |
Helicobacter pylori B38 | 9 | 8 | 7 |
Helicobacter pylori B8 | 16 | 13 | 13 |
Helicobacter pylori F32 | 1 | 1 | 1 |
Helicobacter pylori G27 | 35 | 28 | 23 |
Helicobacter pylori HPAG1 | 10 | 10 | 8 |
Helicobacter pylori J99 | 163 | 138 | 41 |
Helicobacter pylori NCTC 11637 = CCUG 17874 = ATCC 43504 = JCM 12093 | 8 | 8 | 5 |
Helicobacter pylori OK113 | 1 | 1 | 1 |
Helicobacter pylori P12 | 8 | 6 | 6 |
Helicobacter pylori Puno135 | 10 | 10 | 5 |
Helicobacter pylori Shi470 | 1 | 1 | 1 |
Helicobacter pylori v225d | 2 | 2 | 1 |
Helicoverpa armigera (cotton bollworm) | 17 | 14 | 17 |
Helicoverpa armigera NPV NNg1 | 1 | 1 | 1 |
Helicoverpa armigera densovirus | 1 | 1 | 1 |
Helicoverpa armigera nucleopolyhedrovirus | 4 | 3 | 4 |
Helicoverpa armigera nucleopolyhedrovirus G4 | 6 | 6 | 6 |
Hemileuca sp. nucleopolyhedrovirus | 1 | 1 | 1 |
Hendra henipavirus | 17 | 16 | 4 |
Hepatitis B virus | 768 | 747 | 4 |
Hepatitis C virus (isolate H77) | 2 | 2 | 1 |
Hepatitis C virus genotype 1 | 575 | 573 | 2 |
Hepatitis C virus genotype 2 | 12 | 12 | 1 |
Hepatitis C virus genotype 3 | 6 | 6 | 1 |
Hepatitis C virus genotype 4 | 2 | 2 | 1 |
Hepatitis C virus genotype 5 | 1 | 1 | 1 |
Hepatitis delta virus | 13 | 13 | 1 |
Hepatovirus A | 8 | 8 | 2 |
Herbaspirillum seropedicae | 1 | 1 | 1 |
Herbaspirillum seropedicae SmR1 | 9 | 6 | 8 |
Heterocephalus glaber (naked mole-rat) | 8 | 6 | 8 |
Hevea brasiliensis (rubber tree) | 5 | 4 | 5 |
Hibiscus chlorotic ringspot virus | 1 | 1 | 1 |
Hippoglossus hippoglossus (Atlantic halibut) | 1 | 1 | 1 |
Histoplasma mississippiense (nom. inval.) | 1 | 1 | 1 |
Homo sapiens (human) | 988048 | 627775 | 20266 |
Homo sapiens neanderthalensis (Neandertal) | 354 | 247 | 30 |
Hordeum vulgare (barley) | 86 | 81 | 65 |
Hordeum vulgare subsp. vulgare (domesticated barley) | 2 | 2 | 2 |
Human T-cell leukemia virus type I | 193 | 192 | 4 |
Human T-lymphotropic virus 2 | 16 | 16 | 3 |
Human adenovirus B1 | 3 | 2 | 2 |
Human alphaherpesvirus 1 (Herpes simplex virus type 1) | 735 | 566 | 80 |
Human alphaherpesvirus 2 (Herpes simplex virus type 2) | 63 | 52 | 26 |
Human alphaherpesvirus 3 (Varicella-zoster virus) | 80 | 69 | 29 |
Human betaherpesvirus 5 (Human cytomegalovirus) | 578 | 446 | 137 |
Human betaherpesvirus 6A | 25 | 19 | 20 |
Human betaherpesvirus 6B | 11 | 10 | 9 |
Human betaherpesvirus 7 | 6 | 5 | 3 |
Human coronavirus 229E | 10 | 10 | 4 |
Human coronavirus HKU1 | 6 | 6 | 3 |
Human coronavirus NL63 | 7 | 7 | 4 |
Human coronavirus OC43 | 10 | 9 | 5 |
Human endogenous retrovirus K113 | 1 | 1 | 1 |
Human gammaherpesvirus 4 (Epstein-Barr virus) | 805 | 737 | 71 |
Human gammaherpesvirus 8 (Kaposi's sarcoma-associated herpesvirus) | 343 | 306 | 57 |
Human gyrovirus 1 | 1 | 1 | 1 |
Human herpesvirus 4 type 2 (Epstein-Barr virus type 2) | 26 | 18 | 13 |
Human herpesvirus 5 strain AD169 | 1 | 1 | 1 |
Human herpesvirus 8 type M | 57 | 52 | 22 |
Human immunodeficiency virus 1 (HIV-1) | 2313 | 2210 | 10 |
Human immunodeficiency virus 2 | 74 | 68 | 8 |
Human mastadenovirus A | 10 | 9 | 5 |
Human mastadenovirus B | 5 | 5 | 3 |
Human mastadenovirus C | 85 | 77 | 12 |
Human mastadenovirus D | 5 | 5 | 4 |
Human mastadenovirus E | 16 | 15 | 6 |
Human mastadenovirus F | 1 | 1 | 1 |
Human metapneumovirus | 46 | 39 | 13 |
Human orthopneumovirus | 65 | 55 | 10 |
Human orthorubulavirus 2 | 16 | 15 | 4 |
Human papillomavirus | 10 | 10 | 3 |
Human papillomavirus 179 | 17 | 13 | 9 |
Human papillomavirus 5 | 15 | 14 | 3 |
Human papillomavirus type 10 | 2 | 2 | 1 |
Human papillomavirus type 16 | 701 | 585 | 8 |
Human papillomavirus type 26 | 1 | 1 | 1 |
Human papillomavirus type 53 | 1 | 1 | 1 |
Human papillomavirus type 6b | 2 | 2 | 2 |
Human papillomavirus type 90 | 2 | 2 | 2 |
Human parvovirus B19 | 26 | 24 | 5 |
Human polyomavirus 6 | 1 | 1 | 1 |
Human polyomavirus 7 | 1 | 1 | 1 |
Human respirovirus 1 | 6 | 6 | 2 |
Human respirovirus 3 | 34 | 28 | 6 |
Human rotavirus B | 3 | 3 | 2 |
Human spumaretrovirus | 2 | 2 | 2 |
Hydra vulgaris (swiftwater hydra) | 12 | 9 | 11 |
Hydrogenobacter thermophilus TK-6 | 4 | 3 | 3 |
Hydrogenovibrio crunogenus XCL-2 | 2 | 2 | 2 |
Hyperthermus butylicus DSM 5456 | 1 | 1 | 1 |
Hyphantria cunea nucleopolyhedrovirus | 6 | 5 | 4 |
Ichnoviriform sonorense | 1 | 1 | 1 |
Ictalurid herpesvirus 1 (Channel catfish virus) | 1 | 1 | 1 |
Ictalurus punctatus (channel catfish) | 24 | 22 | 24 |
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) | 11 | 5 | 11 |
Infectious bronchitis virus | 40 | 37 | 7 |
Infectious bursal disease virus (Gumboro virus) | 38 | 35 | 3 |
Infectious hematopoietic necrosis virus | 3 | 3 | 2 |
Infectious pancreatic necrosis virus | 4 | 3 | 2 |
Infectious salmon anemia virus | 4 | 4 | 3 |
Infectious spleen and kidney necrosis virus | 5 | 5 | 5 |
Influenza A virus (A/California/07/2009(H1N1)) | 24 | 22 | 5 |
Influenza A virus (A/Hong Kong/1073/99(H9N2)) | 41 | 38 | 8 |
Influenza A virus (A/Korea/426/1968(H2N2)) | 10 | 10 | 5 |
Influenza A virus (A/New York/392/2004(H3N2)) | 76 | 68 | 11 |
Influenza A virus (A/Puerto Rico/8/1934(H1N1)) | 294 | 254 | 12 |
Influenza A virus (A/Shanghai/02/2013(H7N9)) | 33 | 30 | 10 |
Influenza A virus (A/goose/Guangdong/1/1996(H5N1)) | 138 | 122 | 12 |
Influenza B virus (B/Lee/1940) | 43 | 40 | 14 |
Influenza C virus (C/Ann Arbor/1/50) | 12 | 12 | 6 |
Influenza D virus (D/swine/Oklahoma/1334/2011) | 1 | 1 | 1 |
Inovirus M13 | 4 | 4 | 3 |
Invertebrate iridescent virus 6 | 3 | 2 | 3 |
Ixodes scapularis (black-legged tick) | 13 | 11 | 13 |
J-virus | 2 | 2 | 2 |
JC polyomavirus | 40 | 38 | 6 |
Jaagsiekte sheep retrovirus | 10 | 10 | 2 |
Jannaschia sp. CCS1 | 1 | 1 | 1 |
Japanese encephalitis virus | 52 | 52 | 2 |
Jatropha curcas | 6 | 4 | 6 |
Jembrana disease virus | 1 | 1 | 1 |
Juglans regia (English walnut) | 2 | 2 | 2 |
Junonia coenia densovirus | 1 | 1 | 1 |
Kappapapillomavirus 2 | 2 | 2 | 2 |
Ketogulonicigenium vulgare Y25 | 1 | 1 | 1 |
Kingella kingae | 1 | 1 | 1 |
Klebsiella aerogenes KCTC 2190 | 1 | 1 | 1 |
Klebsiella michiganensis E718 | 1 | 1 | 1 |
Klebsiella michiganensis KCTC 1686 | 2 | 1 | 2 |
Klebsiella pneumoniae | 89 | 70 | 40 |
Klebsiella pneumoniae 342 | 16 | 14 | 14 |
Klebsiella pneumoniae CG43 | 6 | 6 | 3 |
Klebsiella pneumoniae KCTC 2242 | 2 | 2 | 1 |
Klebsiella pneumoniae subsp. pneumoniae HS11286 | 31 | 26 | 14 |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | 15 | 14 | 12 |
Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 | 25 | 21 | 20 |
Klebsiella quasipneumoniae | 2 | 1 | 2 |
Kluyveromyces lactis | 37 | 29 | 31 |
Kluyveromyces marxianus DMKU3-1042 | 5 | 4 | 5 |
Koala retrovirus | 1 | 1 | 1 |
Komagataeibacter xylinus | 1 | 1 | 1 |
Komagataella phaffii GS115 | 7 | 6 | 7 |
La Crosse virus | 3 | 3 | 2 |
Laccaria bicolor S238N-H82 | 3 | 3 | 3 |
Lachancea thermotolerans CBS 6340 | 4 | 2 | 4 |
Lachnellula hyalina | 2 | 2 | 2 |
Lachnoclostridium phytofermentans ISDg | 2 | 2 | 2 |
Lacticaseibacillus casei BL23 | 10 | 9 | 10 |
Lacticaseibacillus paracasei ATCC 334 | 1 | 1 | 1 |
Lacticaseibacillus rhamnosus ATCC 8530 | 2 | 1 | 2 |
Lacticaseibacillus rhamnosus GG | 12 | 8 | 9 |
Lactiplantibacillus plantarum | 2 | 2 | 2 |
Lactiplantibacillus plantarum ST-III | 3 | 3 | 3 |
Lactiplantibacillus plantarum WCFS1 | 40 | 33 | 34 |
Lactobacillus acidophilus NCFM | 11 | 10 | 9 |
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 | 2 | 2 | 2 |
Lactobacillus gasseri | 2 | 2 | 2 |
Lactobacillus gasseri ATCC 33323 = JCM 1131 | 3 | 3 | 3 |
Lactobacillus johnsonii NCC 533 | 3 | 2 | 3 |
Lactobacillus phage A2 | 2 | 2 | 2 |
Lactococcus cremoris | 1 | 1 | 1 |
Lactococcus lactis | 11 | 11 | 8 |
Lactococcus lactis subsp. cremoris MG1363 | 22 | 19 | 17 |
Lactococcus lactis subsp. cremoris NZ9000 | 3 | 3 | 2 |
Lactococcus lactis subsp. lactis | 8 | 6 | 6 |
Lactococcus lactis subsp. lactis CV56 | 1 | 1 | 1 |
Lactococcus lactis subsp. lactis Il1403 | 64 | 49 | 47 |
Lactococcus lactis subsp. lactis KF147 | 4 | 4 | 4 |
Lactococcus lactis subsp. lactis bv. diacetylactis | 1 | 1 | 1 |
Lactococcus phage TP901-1 | 3 | 2 | 3 |
Lactococcus phage bIL170 | 1 | 1 | 1 |
Lactuca sativa (cultivated lettuce) | 2 | 2 | 2 |
Lambdavirus lambda | 46 | 39 | 21 |
Laribacter hongkongensis | 2 | 1 | 2 |
Larimichthys crocea (large yellow croaker) | 60 | 43 | 55 |
Lasiodiplodia theobromae | 1 | 1 | 1 |
Lassa mammarenavirus | 18 | 18 | 4 |
Lates calcarifer (barramundi perch) | 9 | 8 | 9 |
Latimeria chalumnae (coelacanth) | 1 | 1 | 1 |
Legionella longbeachae NSW150 | 1 | 1 | 1 |
Legionella pneumophila | 22 | 20 | 20 |
Legionella pneumophila 2300/99 Alcoy | 1 | 1 | 1 |
Legionella pneumophila str. Corby | 6 | 5 | 6 |
Legionella pneumophila str. Lens | 6 | 6 | 6 |
Legionella pneumophila str. Paris | 8 | 5 | 8 |
Legionella pneumophila subsp. pneumophila | 3 | 2 | 3 |
Legionella pneumophila subsp. pneumophila LPE509 | 40 | 33 | 36 |
Legionella pneumophila subsp. pneumophila str. Philadelphia 1 | 37 | 34 | 33 |
Leishmania braziliensis MHOM/BR/75/M2904 | 17 | 15 | 16 |
Leishmania donovani | 55 | 49 | 46 |
Leishmania infantum JPCM5 | 27 | 25 | 23 |
Leishmania major strain Friedlin | 73 | 63 | 65 |
Leishmania mexicana MHOM/GT/2001/U1103 | 11 | 9 | 11 |
Leptinotarsa decemlineata (Colorado potato beetle) | 4 | 4 | 3 |
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' | 3 | 3 | 3 |
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 | 29 | 23 | 22 |
Leptospira interrogans serovar Lai str. 56601 | 21 | 20 | 17 |
Leptospira kirschneri serovar Cynopteri str. 3522 CT | 1 | 1 | 1 |
Leptospira santarosai serovar Shermani str. LT 821 | 1 | 1 | 1 |
Leptospira santarosai str. 2000027870 | 1 | 1 | 1 |
Lettuce infectious yellows virus | 1 | 1 | 1 |
Lettuce mosaic virus | 2 | 2 | 1 |
Lettuce necrotic yellows virus | 2 | 2 | 1 |
Levilactobacillus brevis | 2 | 1 | 2 |
Levilactobacillus brevis ATCC 367 | 4 | 3 | 4 |
Levilactobacillus brevis KB290 | 1 | 1 | 1 |
Ligilactobacillus salivarius UCC118 | 5 | 5 | 4 |
Lily symptomless virus (LSV) | 1 | 1 | 1 |
Limosilactobacillus fermentum IFO 3956 | 1 | 1 | 1 |
Limosilactobacillus reuteri | 1 | 1 | 1 |
Limosilactobacillus reuteri JCM 1112 | 3 | 3 | 2 |
Limosilactobacillus reuteri SD2112 | 3 | 2 | 3 |
Limosilactobacillus reuteri subsp. reuteri | 5 | 4 | 5 |
Limulus polyphemus (Atlantic horseshoe crab) | 1 | 1 | 1 |
Listeria innocua Clip11262 | 5 | 4 | 4 |
Listeria monocytogenes | 6 | 6 | 3 |
Listeria monocytogenes 08-5578 | 1 | 1 | 1 |
Listeria monocytogenes 10403S | 5 | 4 | 4 |
Listeria monocytogenes EGD | 1 | 1 | 1 |
Listeria monocytogenes EGD-e | 222 | 177 | 117 |
Listeria monocytogenes L312 | 1 | 1 | 1 |
Listeria monocytogenes M7 | 5 | 1 | 5 |
Listeria monocytogenes serotype 4b str. CLIP 80459 | 4 | 3 | 4 |
Listeria monocytogenes serotype 4b str. F2365 | 21 | 18 | 15 |
Listeria monocytogenes serotype 4b str. LL195 | 1 | 1 | 1 |
Listeria phage A006 | 1 | 1 | 1 |
Listeria phage A118 | 2 | 1 | 2 |
Listeria phage P35 | 1 | 1 | 1 |
Lloviu cuevavirus | 2 | 1 | 2 |
Loa loa (eye worm) | 1 | 1 | 1 |
Lomovskayavirus BT1 | 1 | 1 | 1 |
Lomovskayavirus C31 | 6 | 4 | 2 |
Lonchura striata domestica (Bengalese finch) | 3 | 2 | 3 |
Lotus japonicus | 41 | 35 | 23 |
Loxodonta africana (African savanna elephant) | 5 | 4 | 4 |
Lujo mammarenavirus | 1 | 1 | 1 |
Lumpy skin disease virus NI-2490 | 1 | 1 | 1 |
Lupinus angustifolius (narrow-leaved blue lupine) | 3 | 3 | 3 |
Lymantria dispar multiple nucleopolyhedrovirus | 3 | 2 | 3 |
Lymphocystis disease virus - isolate China | 2 | 2 | 2 |
Lymphocytic choriomeningitis mammarenavirus | 18 | 16 | 4 |
Lyssavirus australis | 1 | 1 | 1 |
Lyssavirus duvenhage | 1 | 1 | 1 |
Lyssavirus mokola | 3 | 3 | 2 |
Lyssavirus rabies | 35 | 34 | 5 |
Macaca fascicularis (crab-eating macaque) | 79 | 60 | 72 |
Macaca mulatta (Rhesus monkey) | 665 | 507 | 394 |
Macaca nemestrina (pig-tailed macaque) | 7 | 5 | 7 |
Macacine alphaherpesvirus 1 (monkey B virus) | 3 | 2 | 3 |
Macacine betaherpesvirus 3 (Rhesus cytomegalovirus) | 5 | 3 | 4 |
Macacine gammaherpesvirus 4 (Rhesus lymphocryptovirus) | 2 | 2 | 2 |
Macacine gammaherpesvirus 5 (Rhesus rhadinovirus) | 3 | 3 | 3 |
Macaque simian foamy virus | 1 | 1 | 1 |
Machupo mammarenavirus | 4 | 4 | 3 |
Magnetococcus marinus MC-1 | 1 | 1 | 1 |
Magnetospirillum gryphiswaldense MSR-1 | 2 | 2 | 2 |
Magnetospirillum magneticum AMB-1 | 6 | 6 | 6 |
Maize mosaic nucleorhabdovirus | 3 | 1 | 3 |
Maize yellow dwarf virus RMV | 1 | 1 | 1 |
Mal de Rio Cuarto virus | 1 | 1 | 1 |
Malacoplasma penetrans HF-2 | 1 | 1 | 1 |
Malassezia globosa CBS 7966 | 4 | 4 | 4 |
Malus domestica (apple) | 62 | 53 | 51 |
Mamastrovirus 1 | 3 | 3 | 2 |
Mamastrovirus 3 | 1 | 1 | 1 |
Mamestra configurata nucleopolyhedrovirus A | 1 | 1 | 1 |
Mammalian orthoreovirus 1 | 2 | 2 | 1 |
Mammalian orthoreovirus 3 | 14 | 11 | 8 |
Mammaliicoccus sciuri | 1 | 1 | 1 |
Manduca sexta (tobacco hornworm) | 3 | 3 | 3 |
Manihot esculenta (cassava) | 1 | 1 | 1 |
Mannheimia haemolytica M42548 | 1 | 1 | 1 |
Mannheimia haemolytica PHL213 | 2 | 2 | 1 |
Marburg marburgvirus | 28 | 26 | 7 |
Marinithermus hydrothermalis DSM 14884 | 1 | 1 | 1 |
Marinobacter nauticus ATCC 49840 | 4 | 2 | 4 |
Marinobacter nauticus VT8 | 2 | 2 | 1 |
Marinomonas mediterranea MMB-1 | 2 | 2 | 2 |
Mason-Pfizer monkey virus | 14 | 13 | 3 |
Mastacembelus armatus (zig-zag eel) | 1 | 1 | 1 |
Maylandia zebra (zebra mbuna) | 1 | 1 | 1 |
Measles morbillivirus | 112 | 94 | 6 |
Medicago truncatula (barrel medic) | 73 | 62 | 65 |
Megalodesulfovibrio gigas DSM 1382 = ATCC 19364 | 2 | 1 | 2 |
Megavirus chiliensis | 1 | 1 | 1 |
Meiothermus ruber DSM 1279 | 1 | 1 | 1 |
Meleagris gallopavo (turkey) | 56 | 39 | 32 |
Melon necrotic spot virus | 11 | 6 | 5 |
Melopsittacus undulatus (budgerigar) | 2 | 2 | 2 |
Meriones unguiculatus (Mongolian gerbil) | 8 | 6 | 8 |
Merkel cell polyomavirus | 21 | 21 | 4 |
Mesocricetus auratus (golden hamster) | 79 | 61 | 68 |
Mesomycoplasma hyorhinis ATCC 17981 | 1 | 1 | 1 |
Mesomycoplasma hyorhinis DBS 1050 | 1 | 1 | 1 |
Mesorhizobium ciceri biovar biserrulae WSM1271 | 1 | 1 | 1 |
Mesorhizobium japonicum MAFF 303099 | 16 | 14 | 16 |
Metallosphaera cuprina Ar-4 | 2 | 1 | 2 |
Metallosphaera sedula | 1 | 1 | 1 |
Metallosphaera sedula DSM 5348 | 21 | 3 | 21 |
Metarhizium acridum CQMa 102 | 4 | 4 | 4 |
Metarhizium robertsii ARSEF 23 | 3 | 2 | 3 |
Methanobrevibacter ruminantium M1 | 1 | 1 | 1 |
Methanobrevibacter smithii ATCC 35061 | 1 | 1 | 1 |
Methanocaldococcus fervens AG86 | 1 | 1 | 1 |
Methanocaldococcus infernus ME | 1 | 1 | 1 |
Methanocaldococcus jannaschii DSM 2661 | 73 | 70 | 65 |
Methanocella paludicola SANAE | 1 | 1 | 1 |
Methanococcoides burtonii DSM 6242 | 4 | 3 | 4 |
Methanococcus aeolicus Nankai-3 | 1 | 1 | 1 |
Methanococcus maripaludis C7 | 1 | 1 | 1 |
Methanococcus maripaludis S2 | 25 | 18 | 21 |
Methanococcus voltae A3 | 2 | 2 | 2 |
Methanoculleus marisnigri JR1 | 1 | 1 | 1 |
Methanopyrus kandleri AV19 | 2 | 2 | 2 |
Methanosarcina acetivorans C2A | 30 | 26 | 27 |
Methanosarcina barkeri str. Fusaro | 7 | 5 | 7 |
Methanosarcina mazei Go1 | 22 | 21 | 19 |
Methanosarcina thermophila TM-1 | 1 | 1 | 1 |
Methanothermobacter marburgensis str. Marburg | 5 | 3 | 5 |
Methanothermobacter thermautotrophicus str. Delta H | 24 | 22 | 21 |
Methanothrix thermoacetophila PT | 1 | 1 | 1 |
Methylacidiphilum infernorum V4 | 1 | 1 | 1 |
Methylobacterium radiotolerans JCM 2831 | 3 | 1 | 3 |
Methylocella silvestris BL2 | 2 | 1 | 2 |
Methylococcus capsulatus str. Bath | 8 | 6 | 8 |
Methylorubrum extorquens AM1 | 4 | 3 | 3 |
Methylorubrum extorquens PA1 | 1 | 1 | 1 |
Methylotuvimicrobium alcaliphilum 20Z | 1 | 1 | 1 |
Microcebus murinus (gray mouse lemur) | 5 | 5 | 5 |
Micrococcus luteus NCTC 2665 | 1 | 1 | 1 |
Microcystis aeruginosa NIES-843 | 8 | 4 | 5 |
Micromonas pusilla CCMP1545 | 4 | 4 | 1 |
Micromonospora aurantiaca ATCC 27029 | 1 | 1 | 1 |
Micropterus salmoides (largemouth bass) | 2 | 2 | 2 |
Microtus ochrogaster (prairie vole) | 9 | 9 | 6 |
Middle East respiratory syndrome-related coronavirus | 41 | 40 | 9 |
Minute virus of mice | 8 | 8 | 2 |
Mizuhopecten yessoensis (Yesso scallop) | 1 | 1 | 1 |
Moesziomyces antarcticus | 1 | 1 | 1 |
Molluscum contagiosum virus subtype 1 | 5 | 4 | 3 |
Moloney murine leukemia virus | 20 | 20 | 3 |
Moniliophthora perniciosa | 2 | 1 | 2 |
Monodelphis domestica (gray short-tailed opossum) | 35 | 18 | 30 |
Monopterus albus (swamp eel) | 1 | 1 | 1 |
Monosiga brevicollis MX1 | 1 | 1 | 1 |
Moorella thermoacetica ATCC 39073 | 1 | 1 | 1 |
Mopeia Lassa virus reassortant 29 | 1 | 1 | 1 |
Mopeia virus AN20410 | 5 | 3 | 2 |
Moraxella catarrhalis | 2 | 1 | 2 |
Moraxella catarrhalis BBH18 | 8 | 6 | 8 |
Morone saxatilis (striped sea-bass) | 1 | 1 | 1 |
Morus notabilis | 1 | 1 | 1 |
Mouse mammary tumor virus | 8 | 8 | 3 |
Mumps orthorubulavirus | 33 | 27 | 7 |
Mungbean yellow mosaic India virus | 7 | 6 | 4 |
Mungbean yellow mosaic virus | 1 | 1 | 1 |
Mupapillomavirus 1 | 4 | 4 | 2 |
Murid betaherpesvirus 1 (Murine cytomegalovirus) | 9 | 8 | 7 |
Murid betaherpesvirus 8 | 1 | 1 | 1 |
Murid gammaherpesvirus 4 (Murine herpesvirus 68) | 74 | 60 | 29 |
Murine adenovirus 2 | 1 | 1 | 1 |
Murine hepatitis virus | 44 | 42 | 9 |
Murine hepatitis virus strain JHM | 3 | 3 | 2 |
Murine polyomavirus | 8 | 7 | 4 |
Murine polyomavirus strain BG | 3 | 3 | 3 |
Murine respirovirus | 34 | 31 | 8 |
Murine type C retrovirus | 1 | 1 | 1 |
Murray Valley encephalitis virus | 3 | 3 | 1 |
Mus caroli (Ryukyu mouse) | 30 | 30 | 21 |
Mus musculus (house mouse) | 311413 | 221461 | 14266 |
Mus musculus domesticus (western European house mouse) | 3 | 3 | 3 |
Mus musculus molossinus (Japanese wild mouse) | 3 | 3 | 2 |
Mus musculus musculus (eastern European house mouse) | 119 | 112 | 5 |
Mus musculus papillomavirus type 1 | 1 | 1 | 1 |
Mus pahari (shrew mouse) | 52 | 52 | 45 |
Musa acuminata (dwarf banana) | 9 | 5 | 9 |
Musca domestica (house fly) | 6 | 5 | 5 |
Mustela putorius furo (domestic ferret) | 19 | 13 | 17 |
Mycobacterium avium 104 | 9 | 7 | 9 |
Mycobacterium avium subsp. hominissuis | 2 | 2 | 2 |
Mycobacterium avium subsp. paratuberculosis K-10 | 14 | 12 | 14 |
Mycobacterium canettii CIPT 140010059 | 1 | 1 | 1 |
Mycobacterium leprae TN | 22 | 21 | 14 |
Mycobacterium marinum | 1 | 1 | 1 |
Mycobacterium marinum E11 | 3 | 3 | 1 |
Mycobacterium marinum M | 10 | 10 | 10 |
Mycobacterium phage Bethlehem | 1 | 1 | 1 |
Mycobacterium phage Bxb1 | 2 | 2 | 1 |
Mycobacterium phage Fruitloop | 1 | 1 | 1 |
Mycobacterium phage SWU1 | 1 | 1 | 1 |
Mycobacterium phage TM4 | 2 | 2 | 2 |
Mycobacterium tuberculosis 7199-99 | 3 | 3 | 3 |
Mycobacterium tuberculosis CCDC5079 | 1 | 1 | 1 |
Mycobacterium tuberculosis CDC1551 | 21 | 20 | 17 |
Mycobacterium tuberculosis EAI5 | 1 | 1 | 1 |
Mycobacterium tuberculosis F11 | 3 | 3 | 3 |
Mycobacterium tuberculosis H37Ra | 24 | 23 | 22 |
Mycobacterium tuberculosis H37Rv | 2400 | 1969 | 978 |
Mycobacterium tuberculosis KZN 1435 | 1 | 1 | 1 |
Mycobacterium tuberculosis KZN 4207 | 1 | 1 | 1 |
Mycobacterium tuberculosis str. Erdman = ATCC 35801 | 2 | 2 | 2 |
Mycobacterium tuberculosis variant africanum GM041182 | 1 | 1 | 1 |
Mycobacterium tuberculosis variant bovis AF2122/97 | 43 | 38 | 40 |
Mycobacterium tuberculosis variant bovis BCG str. Mexico | 1 | 1 | 1 |
Mycobacterium tuberculosis variant bovis BCG str. Pasteur 1173P2 | 13 | 11 | 13 |
Mycobacterium ulcerans Agy99 | 4 | 4 | 4 |
Mycobacteroides abscessus | 3 | 3 | 3 |
Mycolicibacter sinensis | 1 | 1 | 1 |
Mycolicibacterium smegmatis | 25 | 23 | 24 |
Mycolicibacterium smegmatis MC2 155 | 196 | 166 | 164 |
Mycoplasma arthritidis 158L3-1 | 3 | 3 | 2 |
Mycoplasma capricolum subsp. capricolum ATCC 27343 | 2 | 2 | 2 |
Mycoplasma gallisepticum str. F | 1 | 1 | 1 |
Mycoplasma gallisepticum str. R(low) | 9 | 8 | 7 |
Mycoplasma genitalium G37 | 26 | 22 | 19 |
Mycoplasma hyopneumoniae 232 | 8 | 7 | 8 |
Mycoplasma hyopneumoniae J | 3 | 3 | 3 |
Mycoplasma mobile 163K | 7 | 6 | 3 |
Mycoplasma mycoides subsp. mycoides SC str. PG1 | 4 | 3 | 4 |
Mycoplasma pneumoniae | 1 | 1 | 1 |
Mycoplasma pneumoniae FH | 3 | 3 | 2 |
Mycoplasma pneumoniae M129 | 42 | 34 | 31 |
Mycoplasma pneumoniae M129-B7 | 1 | 1 | 1 |
Mycoplasmopsis agalactiae PG2 | 8 | 3 | 8 |
Mycoplasmopsis bovis Hubei-1 | 1 | 1 | 1 |
Mycoplasmopsis bovis PG45 | 3 | 3 | 3 |
Mycoplasmopsis synoviae 53 | 3 | 3 | 2 |
Myotis davidii | 3 | 3 | 3 |
Myotis gammaherpesvirus 8 | 1 | 1 | 1 |
Mythimna loreyi densovirus | 1 | 1 | 1 |
Mytilus galloprovincialis (Mediterranean mussel) | 1 | 1 | 1 |
Myxococcus xanthus DK 1622 | 67 | 49 | 46 |
Myxoma virus | 10 | 10 | 10 |
Myzus persicae (green peach aphid) | 3 | 2 | 3 |
Naegleria gruberi | 1 | 1 | 1 |
Nannospalax galili (Upper Galilee mountains blind mole rat) | 1 | 1 | 1 |
Nanoarchaeum equitans Kin4-M | 1 | 1 | 1 |
Nasonia vitripennis (jewel wasp) | 22 | 15 | 18 |
Natrialba phage PhiCh1 | 1 | 1 | 1 |
Natronomonas pharaonis DSM 2160 | 14 | 14 | 4 |
Necator americanus (New World hookworm) | 2 | 2 | 2 |
Neisseria gonorrhoeae | 8 | 8 | 8 |
Neisseria gonorrhoeae FA 1090 | 80 | 55 | 62 |
Neisseria gonorrhoeae MS11 | 2 | 1 | 2 |
Neisseria gonorrhoeae NCCP11945 | 11 | 8 | 10 |
Neisseria lactamica 020-06 | 1 | 1 | 1 |
Neisseria meningitidis | 9 | 7 | 9 |
Neisseria meningitidis 053442 | 4 | 4 | 4 |
Neisseria meningitidis 8013 | 3 | 3 | 2 |
Neisseria meningitidis FAM18 | 10 | 6 | 6 |
Neisseria meningitidis H44/76 | 2 | 2 | 2 |
Neisseria meningitidis MC58 | 94 | 78 | 72 |
Neisseria meningitidis NZ-05/33 | 5 | 5 | 3 |
Neisseria meningitidis WUE 2594 | 2 | 2 | 2 |
Neisseria meningitidis Z2491 | 15 | 13 | 12 |
Neisseria meningitidis alpha14 | 1 | 1 | 1 |
Nelumbo nucifera (sacred lotus) | 2 | 2 | 2 |
Nematostella vectensis (starlet sea anemone) | 10 | 7 | 10 |
Neodiprion abietis NPV | 1 | 1 | 1 |
Neogale vison (American mink) | 1 | 1 | 1 |
Neospora caninum Liverpool | 4 | 3 | 4 |
Neurospora crassa OR74A | 242 | 184 | 162 |
Newcastle disease virus B1 | 57 | 48 | 6 |
Nicotiana attenuata | 11 | 9 | 10 |
Nicotiana sylvestris (wood tobacco) | 2 | 2 | 2 |
Nicotiana tabacum (common tobacco) | 60 | 50 | 55 |
Nicrophorus vespilloides | 2 | 2 | 2 |
Nilaparvata lugens (brown planthopper) | 28 | 22 | 26 |
Nipah henipavirus | 47 | 40 | 5 |
Nitrobacter winogradskyi Nb-255 | 1 | 1 | 1 |
Nitrosomonas europaea ATCC 19718 | 7 | 7 | 6 |
Nitrosopumilus maritimus SCM1 | 2 | 1 | 2 |
Nocardia farcinica | 1 | 1 | 1 |
Nocardia farcinica IFM 10152 | 2 | 2 | 2 |
Nodamura virus | 2 | 2 | 1 |
Nomascus leucogenys (northern white-cheeked gibbon) | 2 | 2 | 2 |
Nora virus | 1 | 1 | 1 |
Norovirus GI | 6 | 6 | 2 |
Norovirus GII | 4 | 4 | 3 |
Norovirus GV | 9 | 9 | 3 |
Nosema ceranae BRL01 | 1 | 1 | 1 |
Nostoc punctiforme PCC 73102 | 9 | 9 | 8 |
Nostoc sp. PCC 7120 = FACHB-418 | 86 | 66 | 61 |
Nothobranchius furzeri (turquoise killifish) | 6 | 3 | 6 |
Notothenia coriiceps (black rockcod) | 2 | 2 | 2 |
Novosphingobium aromaticivorans | 1 | 1 | 1 |
Novosphingobium aromaticivorans DSM 12444 | 3 | 3 | 3 |
Novosphingobium sp. KA1 | 1 | 1 | 1 |
Oat blue dwarf virus | 1 | 1 | 1 |
Octodon degus (degu) | 1 | 1 | 1 |
Octopus vulgaris (common octopus) | 1 | 1 | 1 |
Odobenus rosmarus divergens (Pacific walrus) | 1 | 1 | 1 |
Odocoileus virginianus (white-tailed deer) | 2 | 2 | 2 |
Odontoglossum ringspot virus | 2 | 1 | 2 |
Oenococcus oeni PSU-1 | 9 | 6 | 8 |
Ogataea parapolymorpha DL-1 | 7 | 6 | 7 |
Olea europaea var. sylvestris (wild olive) | 1 | 1 | 1 |
Oleidesulfovibrio alaskensis G20 | 4 | 4 | 4 |
Olive mild mosaic virus | 1 | 1 | 1 |
Oncorhynchus keta (chum salmon) | 3 | 1 | 3 |
Oncorhynchus kisutch (coho salmon) | 1 | 1 | 1 |
Oncorhynchus mykiss (rainbow trout) | 223 | 160 | 165 |
Onion yellows phytoplasma | 1 | 1 | 1 |
Onion yellows phytoplasma OY-M | 1 | 1 | 1 |
Onychomys torridus (southern grasshopper mouse) | 1 | 1 | 1 |
Orbilia oligospora ATCC 24927 | 3 | 3 | 3 |
Orcinus orca (killer whale) | 1 | 1 | 1 |
Oreochromis niloticus (Nile tilapia) | 107 | 80 | 98 |
Orf virus | 15 | 15 | 10 |
Orgyia pseudotsugata multiple nucleopolyhedrovirus | 2 | 2 | 2 |
Orientia tsutsugamushi str. Boryong | 1 | 1 | 1 |
Orientia tsutsugamushi str. Ikeda | 1 | 1 | 1 |
Ornithorhynchus anatinus (platypus) | 7 | 6 | 7 |
Oropouche virus | 1 | 1 | 1 |
Oryctolagus cuniculus (rabbit) | 1293 | 987 | 590 |
Oryza brachyantha (malo sina) | 4 | 4 | 4 |
Oryza meridionalis (Australian wild rice) | 1 | 1 | 1 |
Oryza sativa (Asian cultivated rice) | 1 | 1 | 1 |
Oryza sativa Indica Group (long-grained rice) | 3 | 3 | 1 |
Oryza sativa Japonica Group (Japanese rice) | 935 | 785 | 696 |
Oryzias latipes (Japanese medaka) | 179 | 138 | 146 |
Oryzias melastigma (Indian medaka) | 2 | 2 | 2 |
Ostreococcus lucimarinus CCE9901 | 1 | 1 | 1 |
Ostreococcus tauri | 6 | 6 | 6 |
Ostreococcus tauri virus 2 | 1 | 1 | 1 |
Ostrinia furnacalis (Asian corn borer) | 2 | 2 | 2 |
Otolemur garnettii (small-eared galago) | 3 | 2 | 3 |
Ourmia melon virus | 1 | 1 | 1 |
Ovine enzootic nasal tumor virus | 1 | 1 | 1 |
Ovine gammaherpesvirus 2 | 3 | 3 | 3 |
Ovis aries (sheep) | 1466 | 1059 | 658 |
Paenarthrobacter aurescens TC1 | 2 | 2 | 2 |
Paenarthrobacter nicotinovorans | 1 | 1 | 1 |
Paenibacillus larvae subsp. larvae | 1 | 1 | 1 |
Paenibacillus polymyxa M1 | 1 | 1 | 1 |
Paenibacillus polymyxa SC2 | 2 | 2 | 2 |
Paenibacillus sp. Y412MC10 | 1 | 1 | 1 |
Pan paniscus (pygmy chimpanzee) | 2 | 2 | 2 |
Pan troglodytes (chimpanzee) | 80 | 70 | 67 |
Panicum mosaic satellite virus | 2 | 2 | 1 |
Panicum virgatum (switchgrass) | 1 | 1 | 1 |
Panine betaherpesvirus 2 (Chimpanzee cytomegalovirus) | 1 | 1 | 1 |
Pantoea agglomerans | 2 | 2 | 2 |
Pantoea ananatis LMG 20103 | 1 | 1 | 1 |
Papaver somniferum (opium poppy) | 2 | 2 | 2 |
Papaya mosaic virus | 3 | 3 | 1 |
Papaya ringspot virus | 5 | 5 | 1 |
Papiine alphaherpesvirus 2 | 1 | 1 | 1 |
Papilio xuthus (Asian swallowtail) | 2 | 2 | 2 |
Papio anubis (olive baboon) | 34 | 23 | 31 |
Paprika mild mottle virus | 2 | 1 | 2 |
Parabacteroides distasonis ATCC 8503 | 11 | 2 | 11 |
Paraburkholderia phymatum STM815 | 2 | 1 | 2 |
Paraburkholderia xenovorans LB400 | 17 | 12 | 14 |
Paracoccidioides brasiliensis Pb18 | 1 | 1 | 1 |
Paracoccidioides lutzii Pb01 | 5 | 5 | 5 |
Paracoccus aminophilus | 3 | 1 | 3 |
Paracoccus denitrificans PD1222 | 19 | 16 | 13 |
Parageobacillus thermoglucosidasius C56-YS93 | 1 | 1 | 1 |
Parainfluenza virus 5 | 25 | 24 | 4 |
Paralichthys olivaceus (Japanese flounder) | 49 | 40 | 48 |
Paramecium bursaria Chlorella virus 1 | 8 | 8 | 8 |
Paramecium tetraurelia strain d4-2 | 9 | 5 | 9 |
Parastagonospora nodorum SN15 | 2 | 2 | 2 |
Parasteatoda tepidariorum (common house spider) | 3 | 2 | 3 |
Parasynechococcus marenigrum WH 8102 | 10 | 8 | 6 |
Parechovirus A | 1 | 1 | 1 |
Pariacoto virus | 1 | 1 | 1 |
Parus major (Great Tit) | 2 | 2 | 2 |
Paslahepevirus balayani | 44 | 43 | 4 |
Pasteurella multocida | 4 | 4 | 4 |
Pasteurella multocida subsp. multocida str. HN06 | 2 | 2 | 1 |
Pasteurella multocida subsp. multocida str. Pm70 | 9 | 8 | 8 |
Pea seed-borne mosaic virus | 1 | 1 | 1 |
Peanut bud necrosis virus | 2 | 2 | 2 |
Peanut stunt virus | 2 | 2 | 1 |
Pectobacterium atrosepticum SCRI1043 | 15 | 11 | 13 |
Pectobacterium carotovorum subsp. carotovorum PC1 | 4 | 3 | 4 |
Pediculus humanus corporis (human body louse) | 8 | 7 | 8 |
Pedobacter heparinus DSM 2366 | 1 | 1 | 1 |
Pelargonium flower break virus | 3 | 2 | 2 |
Pelobacter propionicus DSM 2379 | 1 | 1 | 1 |
Pelodiscus sinensis (Chinese soft-shelled turtle) | 7 | 5 | 7 |
Penaeus japonicus | 2 | 2 | 2 |
Penaeus monodon (black tiger shrimp) | 4 | 4 | 3 |
Penaeus stylirostris penstyldensovirus 1 | 2 | 1 | 2 |
Penaeus vannamei (Pacific white shrimp) | 26 | 23 | 26 |
Penicillium digitatum Pd1 | 3 | 3 | 3 |
Penicillium rubens Wisconsin 54-1255 | 13 | 10 | 13 |
Pepino mosaic virus | 2 | 2 | 2 |
Periplaneta fuliginosa densovirus | 2 | 2 | 1 |
Perkinsus marinus ATCC 50983 | 1 | 1 | 1 |
Peromyscus leucopus (white-footed mouse) | 1 | 1 | 1 |
Peromyscus maniculatus bairdii (prairie deer mouse) | 2 | 2 | 2 |
Peste des petits ruminants virus | 9 | 7 | 6 |
Petromyzon marinus (sea lamprey) | 4 | 3 | 4 |
Phaeodactylum tricornutum CCAP 1055/1 | 12 | 7 | 12 |
Phage Gifsy-1 | 1 | 1 | 1 |
Phaseolus vulgaris (French bean) | 19 | 17 | 17 |
Phocaeicola vulgatus ATCC 8482 | 4 | 4 | 3 |
Photobacterium damselae subsp. damselae | 1 | 1 | 1 |
Photobacterium leiognathi subsp. mandapamensis svers.1.1. | 1 | 1 | 1 |
Photobacterium profundum SS9 | 1 | 1 | 1 |
Photorhabdus laumondii subsp. laumondii TTO1 | 5 | 5 | 5 |
Photorhabdus luminescens subsp. luminescens | 1 | 1 | 1 |
Phyllostomus discolor (pale spear-nosed bat) | 2 | 1 | 2 |
Physcomitrium patens | 54 | 42 | 50 |
Physeter catodon (sperm whale) | 8 | 8 | 1 |
Phytophthora infestans T30-4 | 15 | 12 | 13 |
Phytophthora sojae | 3 | 3 | 3 |
Pichia kudriavzevii | 1 | 1 | 1 |
Pichinde virus | 1 | 1 | 1 |
Picrophilus torridus DSM 9790 | 6 | 3 | 6 |
Pieris rapae (cabbage white) | 3 | 2 | 3 |
Pimephales promelas (fathead minnow) | 1 | 1 | 1 |
Pinus sylvestris (Scots pine) | 1 | 1 | 1 |
Pipistrellus bat coronavirus HKU5 | 1 | 1 | 1 |
Planktothrix phage PaV-LD | 1 | 1 | 1 |
Plantago asiatica mosaic virus | 1 | 1 | 1 |
Plasmodium berghei | 1 | 1 | 1 |
Plasmodium berghei ANKA | 73 | 64 | 63 |
Plasmodium chabaudi chabaudi | 2 | 2 | 2 |
Plasmodium falciparum (malaria parasite P. falciparum) | 6 | 6 | 1 |
Plasmodium falciparum 3D7 | 1052 | 896 | 390 |
Plasmodium knowlesi strain H | 10 | 10 | 8 |
Plasmodium malariae | 3 | 3 | 3 |
Plasmodium reichenowi | 1 | 1 | 1 |
Plasmodium vivax (malaria parasite P. vivax) | 55 | 50 | 34 |
Plasmodium yoelii | 16 | 12 | 14 |
Pleurotus ostreatus (oyster mushroom) | 2 | 1 | 2 |
Plum pox virus | 5 | 5 | 1 |
Plutella xylostella (diamondback moth) | 26 | 17 | 21 |
Pneumonia virus of mice J3666 | 3 | 2 | 3 |
Podarcis muralis (Common wall lizard) | 1 | 1 | 1 |
Podospora anserina S mat+ | 2 | 2 | 2 |
Poecilia reticulata (guppy) | 2 | 2 | 2 |
Polyomavirus sp. | 2 | 2 | 2 |
Pongo abelii (Sumatran orangutan) | 7 | 6 | 7 |
Populus alba (white poplar) | 1 | 1 | 1 |
Populus euphratica (Euphrates poplar) | 2 | 2 | 2 |
Populus trichocarpa (black cottonwood) | 42 | 32 | 42 |
Porcine circovirus 1 | 1 | 1 | 1 |
Porcine circovirus 2 | 14 | 14 | 3 |
Porcine circovirus 3 | 1 | 1 | 1 |
Porcine circovirus type 1/2a | 1 | 1 | 1 |
Porcine coronavirus HKU15 | 1 | 1 | 1 |
Porcine epidemic diarrhea virus | 42 | 41 | 6 |
Porcine hemagglutinating encephalomyelitis virus | 2 | 2 | 1 |
Porcine kobuvirus | 1 | 1 | 1 |
Porcine orthorubulavirus | 1 | 1 | 1 |
Porcine parvovirus | 4 | 4 | 3 |
Porcine reproductive and respiratory syndrome virus | 110 | 98 | 11 |
Porcine torovirus | 2 | 2 | 1 |
Porphyromonas gingivalis ATCC 33277 | 60 | 49 | 34 |
Porphyromonas gingivalis TDC60 | 2 | 2 | 2 |
Porphyromonas gingivalis W83 | 61 | 51 | 45 |
Potato leafroll virus | 3 | 3 | 3 |
Potato mop-top virus | 2 | 2 | 2 |
Potato virus A | 4 | 4 | 1 |
Potato virus X | 7 | 7 | 4 |
Potato virus Y | 11 | 11 | 2 |
Prevotella copri DSM 18205 | 1 | 1 | 1 |
Priestia megaterium | 1 | 1 | 1 |
Priestia megaterium DSM 319 | 5 | 4 | 5 |
Priestia megaterium QM B1551 | 1 | 1 | 1 |
Priestia megaterium WSH-002 | 1 | 1 | 1 |
Primate T-lymphotropic virus 1 | 1 | 1 | 1 |
Primate bocaparvovirus 1 | 5 | 5 | 3 |
Prochlorococcus marinus str. AS9601 | 1 | 1 | 1 |
Prochlorococcus marinus str. MIT 9312 | 1 | 1 | 1 |
Prochlorococcus marinus subsp. marinus str. CCMP1375 | 2 | 2 | 2 |
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 | 3 | 2 | 3 |
Proteus mirabilis BB2000 | 1 | 1 | 1 |
Proteus mirabilis HI4320 | 18 | 12 | 18 |
Proteus vulgaris | 8 | 6 | 5 |
Providencia alcalifaciens Dmel2 | 1 | 1 | 1 |
Providencia stuartii | 3 | 3 | 3 |
Prunus avium (sweet cherry) | 2 | 1 | 2 |
Prunus mume (Japanese apricot) | 1 | 1 | 1 |
Prunus necrotic ringspot virus | 1 | 1 | 1 |
Prunus persica (peach) | 18 | 13 | 18 |
Pseudoalteromonas phage PM2 | 1 | 1 | 1 |
Pseudoalteromonas sp. SM9913 | 1 | 1 | 1 |
Pseudoalteromonas translucida TAC125 | 9 | 8 | 8 |
Pseudogymnoascus destructans 20631-21 | 1 | 1 | 1 |
Pseudomonas aeruginosa | 26 | 21 | 18 |
Pseudomonas aeruginosa B136-33 | 3 | 2 | 3 |
Pseudomonas aeruginosa DSM 50071 = NBRC 12689 | 1 | 1 | 1 |
Pseudomonas aeruginosa LESB58 | 5 | 5 | 4 |
Pseudomonas aeruginosa M18 | 3 | 3 | 3 |
Pseudomonas aeruginosa MTB-1 | 1 | 1 | 1 |
Pseudomonas aeruginosa NCGM2.S1 | 1 | 1 | 1 |
Pseudomonas aeruginosa PA7 | 11 | 9 | 11 |
Pseudomonas aeruginosa PAO1 | 1409 | 1032 | 650 |
Pseudomonas aeruginosa PAO1-VE13 | 1 | 1 | 1 |
Pseudomonas aeruginosa UCBPP-PA14 | 75 | 50 | 61 |
Pseudomonas aeruginosa c7447m | 2 | 2 | 2 |
Pseudomonas alkylphenolica | 1 | 1 | 1 |
Pseudomonas brassicacearum subsp. brassicacearum NFM421 | 1 | 1 | 1 |
Pseudomonas fluorescens | 6 | 6 | 6 |
Pseudomonas fluorescens A506 | 1 | 1 | 1 |
Pseudomonas fluorescens Pf0-1 | 3 | 3 | 3 |
Pseudomonas fluorescens SBW25 | 2 | 2 | 2 |
Pseudomonas lurida | 1 | 1 | 1 |
Pseudomonas ogarae | 4 | 4 | 4 |
Pseudomonas phage AF | 1 | 1 | 1 |
Pseudomonas phage DMS3 | 1 | 1 | 1 |
Pseudomonas phage LUZ19 | 1 | 1 | 1 |
Pseudomonas phage PaP3 | 2 | 2 | 2 |
Pseudomonas phage phi6 | 7 | 6 | 3 |
Pseudomonas phage phi8 | 1 | 1 | 1 |
Pseudomonas protegens Pf-5 | 7 | 6 | 7 |
Pseudomonas putida | 15 | 15 | 14 |
Pseudomonas putida BIRD-1 | 1 | 1 | 1 |
Pseudomonas putida DOT-T1E | 2 | 2 | 2 |
Pseudomonas putida F1 | 6 | 6 | 6 |
Pseudomonas putida GB-1 | 2 | 1 | 2 |
Pseudomonas putida KT2440 | 117 | 89 | 83 |
Pseudomonas putida NBRC 14164 | 2 | 2 | 2 |
Pseudomonas putida S16 | 2 | 2 | 2 |
Pseudomonas putida W619 | 1 | 1 | 1 |
Pseudomonas savastanoi pv. phaseolicola 1448A | 12 | 8 | 12 |
Pseudomonas sp. ADP | 2 | 2 | 2 |
Pseudomonas sp. MC1 | 1 | 1 | 1 |
Pseudomonas stutzeri A1501 | 4 | 4 | 4 |
Pseudomonas stutzeri ATCC 17588 = LMG 11199 | 1 | 1 | 1 |
Pseudomonas stutzeri CCUG 29243 | 1 | 1 | 1 |
Pseudomonas syringae pv. maculicola str. M6 | 1 | 1 | 1 |
Pseudomonas syringae pv. syringae | 2 | 1 | 2 |
Pseudomonas syringae pv. syringae B728a | 13 | 13 | 12 |
Pseudomonas syringae pv. tomato str. DC3000 | 80 | 66 | 48 |
Pseudomonas virus Yua | 1 | 1 | 1 |
Pseudoplusia includens SNPV IE | 1 | 1 | 1 |
Pseudopodoces humilis (Tibetan ground-tit) | 1 | 1 | 1 |
Pteropus vampyrus (large flying fox) | 2 | 2 | 2 |
Punica granatum (pomegranate) | 3 | 1 | 3 |
Purpureocillium lilacinum (nematode egg-parasitic fungus) | 2 | 1 | 2 |
Puumala orthohantavirus | 2 | 2 | 1 |
Pyrenophora tritici-repentis Pt-1C-BFP | 1 | 1 | 1 |
Pyricularia oryzae 70-15 | 70 | 48 | 68 |
Pyrobaculum aerophilum str. IM2 | 12 | 10 | 12 |
Pyrobaculum calidifontis JCM 11548 | 4 | 4 | 4 |
Pyrobaculum ferrireducens | 1 | 1 | 1 |
Pyrococcus abyssi GE5 | 13 | 12 | 11 |
Pyrococcus furiosus COM1 | 4 | 3 | 4 |
Pyrococcus furiosus DSM 3638 | 90 | 78 | 69 |
Pyrococcus horikoshii OT3 | 91 | 80 | 70 |
Pyrococcus sp. ST04 | 1 | 1 | 1 |
Pyrococcus yayanosii CH1 | 1 | 1 | 1 |
Pyrus x bretschneideri (Chinese white pear) | 3 | 3 | 3 |
Python bivittatus (Burmese python) | 1 | 1 | 1 |
Rabbit fibroma virus | 1 | 1 | 1 |
Rabbit hemorrhagic disease virus | 7 | 7 | 1 |
Rahnella aquatilis | 1 | 1 | 1 |
Rahnella aquatilis HX2 | 1 | 1 | 1 |
Ralstonia solanacearum | 1 | 1 | 1 |
Ralstonia solanacearum CFBP2957 | 1 | 1 | 1 |
Ralstonia solanacearum GMI1000 | 14 | 11 | 12 |
Ralstonia solanacearum MolK2 | 3 | 1 | 3 |
Raptor adenovirus 1 | 1 | 1 | 1 |
Rasamsonia emersonii CBS 393.64 | 1 | 1 | 1 |
Raspberry bushy dwarf virus | 1 | 1 | 1 |
Rattus exulans (Polynesian rat) | 2 | 2 | 1 |
Rattus norvegicus (Norway rat) | 94252 | 65322 | 7550 |
Rattus rattus (black rat) | 6 | 6 | 6 |
Red clover necrotic mosaic virus | 5 | 5 | 4 |
Redspotted grouper nervous necrosis virus | 2 | 2 | 1 |
Respiratory syncytial virus | 76 | 72 | 10 |
Reston ebolavirus | 9 | 8 | 4 |
Reticuloendotheliosis virus | 4 | 3 | 2 |
Rhinovirus A | 4 | 4 | 1 |
Rhinovirus C | 2 | 2 | 1 |
Rhipicephalus microplus (southern cattle tick) | 2 | 1 | 2 |
Rhizobium etli CFN 42 | 30 | 21 | 26 |
Rhizobium leguminosarum bv. trifolii CB782 | 1 | 1 | 1 |
Rhizobium leguminosarum bv. viciae 3841 | 17 | 11 | 17 |
Rhizobium tropici CIAT 899 | 1 | 1 | 1 |
Rhizorhabdus wittichii RW1 | 1 | 1 | 1 |
Rhodobacter capsulatus | 3 | 3 | 3 |
Rhodobacter capsulatus SB 1003 | 37 | 23 | 31 |
Rhodococcus equi | 12 | 9 | 10 |
Rhodococcus fascians D188 | 1 | 1 | 1 |
Rhodococcus hoagii 103S | 2 | 2 | 2 |
Rhodococcus jostii RHA1 | 19 | 12 | 19 |
Rhodococcus opacus B4 | 1 | 1 | 1 |
Rhodococcus ruber | 1 | 1 | 1 |
Rhodopseudomonas palustris CGA009 | 19 | 12 | 18 |
Rhodopseudomonas palustris DX-1 | 1 | 1 | 1 |
Rhodopseudomonas palustris TIE-1 | 4 | 3 | 4 |
Rhodospirillum centenum SW | 1 | 1 | 1 |
Rhodospirillum rubrum ATCC 11170 | 8 | 6 | 6 |
Rhodothermus marinus DSM 4252 | 4 | 2 | 4 |
Rice black streaked dwarf virus | 7 | 5 | 3 |
Rice dwarf virus | 1 | 1 | 1 |
Rice gall dwarf virus | 2 | 2 | 2 |
Rice grassy stunt tenuivirus | 2 | 1 | 2 |
Rice ragged stunt virus | 1 | 1 | 1 |
Rice stripe tenuivirus | 6 | 6 | 2 |
Rice yellow mottle virus | 3 | 3 | 1 |
Ricinus communis (castor bean) | 7 | 7 | 7 |
Rickettsia bellii RML369-C | 1 | 1 | 1 |
Rickettsia conorii str. Malish 7 | 7 | 6 | 4 |
Rickettsia prowazekii str. Chernikova | 1 | 1 | 1 |
Rickettsia prowazekii str. Madrid E | 9 | 7 | 9 |
Rickettsia rickettsii str. 'Sheila Smith' | 1 | 1 | 1 |
Rickettsia typhi str. Wilmington | 5 | 3 | 5 |
Riemerella anatipestifer ATCC 11845 = DSM 15868 | 5 | 5 | 5 |
Riemerella anatipestifer RA-CH-1 | 1 | 1 | 1 |
Rift Valley fever virus | 26 | 25 | 5 |
Rinderpest virus (strain Kabete O) | 4 | 4 | 2 |
Rippkaea orientalis PCC 8801 | 1 | 1 | 1 |
Rodentibacter pneumotropicus | 1 | 1 | 1 |
Rosa chinensis (China rose) | 1 | 1 | 1 |
Roseibium aggregatum | 1 | 1 | 1 |
Roseobacter denitrificans OCh 114 | 2 | 2 | 2 |
Ross River virus | 5 | 5 | 2 |
Rotavirus A | 45 | 42 | 11 |
Rotavirus C | 15 | 15 | 7 |
Rotavirus D chicken/05V0049/DEU/2005 | 1 | 1 | 1 |
Rotavirus G chicken/03V0567/DEU/2003 | 1 | 1 | 1 |
Rotavirus G3 | 3 | 2 | 3 |
Rotavirus I | 1 | 1 | 1 |
Rous sarcoma virus | 25 | 25 | 3 |
Rubella virus | 12 | 11 | 2 |
Ruegeria pomeroyi DSS-3 | 4 | 4 | 3 |
Ruminiclostridium cellulolyticum H10 | 3 | 1 | 3 |
Ryegrass mottle virus | 1 | 1 | 1 |
SARS coronavirus Rs_672/2006 | 5 | 5 | 4 |
SARS coronavirus Tor2 | 249 | 230 | 13 |
SFTS virus HB29 | 4 | 4 | 2 |
Saccharolobus solfataricus | 13 | 10 | 10 |
Saccharolobus solfataricus 98/2 | 1 | 1 | 1 |
Saccharolobus solfataricus P2 | 134 | 114 | 84 |
Saccharomyces cerevisiae (baker's yeast) | 7 | 7 | 6 |
Saccharomyces cerevisiae S288C | 18246 | 11709 | 3546 |
Saccharomyces eubayanus | 4 | 3 | 4 |
Saccharophagus degradans 2-40 | 2 | 2 | 2 |
Saccharopolyspora erythraea NRRL 2338 | 8 | 6 | 7 |
Saccoglossus kowalevskii | 3 | 3 | 1 |
Saffold virus | 2 | 2 | 1 |
Saimiri boliviensis (Bolivian squirrel monkey) | 7 | 3 | 7 |
Saimiriine betaherpesvirus 4 | 1 | 1 | 1 |
Saimiriine gammaherpesvirus 2 (Herpesvirus saimiri) | 2 | 2 | 2 |
Saint Louis encephalitis virus | 3 | 3 | 1 |
Salinibacter ruber DSM 13855 | 1 | 1 | 1 |
Salinispora arenicola CNS-205 | 1 | 1 | 1 |
Salmo salar (Atlantic salmon) | 83 | 64 | 72 |
Salmonella bongori N268-08 | 1 | 1 | 1 |
Salmonella bongori NCTC 12419 | 1 | 1 | 1 |
Salmonella enterica | 1 | 1 | 1 |
Salmonella enterica subsp. arizonae serovar 62:z4,z23:- str. RSK2980 | 1 | 1 | 1 |
Salmonella enterica subsp. enterica serovar Bovismorbificans | 1 | 1 | 1 |
Salmonella enterica subsp. enterica serovar California | 1 | 1 | 1 |
Salmonella enterica subsp. enterica serovar Choleraesuis | 1 | 1 | 1 |
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 | 5 | 5 | 5 |
Salmonella enterica subsp. enterica serovar Dublin | 1 | 1 | 1 |
Salmonella enterica subsp. enterica serovar Enteritidis | 2 | 2 | 2 |
Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 | 7 | 6 | 7 |
Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 | 3 | 3 | 2 |
Salmonella enterica subsp. enterica serovar Heidelberg | 1 | 1 | 1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 | 2 | 2 | 1 |
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 | 6 | 6 | 5 |
Salmonella enterica subsp. enterica serovar Typhi | 1 | 1 | 1 |
Salmonella enterica subsp. enterica serovar Typhi str. CT18 | 66 | 48 | 53 |
Salmonella enterica subsp. enterica serovar Typhi str. Ty2 | 22 | 16 | 18 |
Salmonella enterica subsp. enterica serovar Typhimurium | 11 | 11 | 9 |
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | 28 | 17 | 26 |
Salmonella enterica subsp. enterica serovar Typhimurium str. DT2 | 1 | 1 | 1 |
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | 1042 | 751 | 497 |
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | 20 | 13 | 20 |
Salmonella enterica subsp. enterica serovar Typhimurium str. STM709 | 1 | 1 | 1 |
Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 | 4 | 3 | 4 |
Salmonella phage IKe | 1 | 1 | 1 |
Salmonella phage P22 | 25 | 20 | 6 |
Salmonella phage SP6 | 4 | 2 | 3 |
Salmonella phage SPN1S | 1 | 1 | 1 |
Salmonella phage SPN9CC | 1 | 1 | 1 |
Sander lucioperca (pikeperch) | 1 | 1 | 1 |
Sandfly fever Naples virus | 1 | 1 | 1 |
Sandfly fever Turkey virus | 1 | 1 | 1 |
Sapovirus Mc10 | 3 | 3 | 1 |
Sarcophilus harrisii (Tasmanian devil) | 3 | 2 | 3 |
Satellite tobacco mosaic virus | 1 | 1 | 1 |
Scheffersomyces stipitis CBS 6054 | 16 | 12 | 13 |
Schistosoma haematobium | 1 | 1 | 1 |
Schistosoma japonicum | 1 | 1 | 1 |
Schistosoma mansoni | 48 | 40 | 43 |
Schizophyllum commune H4-8 | 6 | 4 | 6 |
Schizosaccharomyces japonicus yFS275 | 3 | 3 | 3 |
Schizosaccharomyces pombe (fission yeast) | 2667 | 1767 | 1026 |
Sclerotinia sclerotiorum 1980 UF-70 | 9 | 7 | 9 |
Scophthalmus maximus (turbot) | 14 | 8 | 13 |
Selaginella moellendorffii | 3 | 2 | 3 |
Semliki Forest virus | 31 | 31 | 2 |
Senecavirus A | 3 | 3 | 1 |
Sepik virus | 2 | 2 | 1 |
Serinus canaria (Common canary) | 1 | 1 | 1 |
Seriola lalandi dorsalis | 3 | 1 | 3 |
Serratia marcescens | 6 | 5 | 6 |
Serratia marcescens FGI94 | 1 | 1 | 1 |
Serratia marcescens subsp. marcescens Db11 | 7 | 5 | 6 |
Serratia proteamaculans | 1 | 1 | 1 |
Serratia proteamaculans 568 | 2 | 2 | 2 |
Serratia sp. AS12 | 1 | 1 | 1 |
Sesbania mosaic virus | 8 | 7 | 4 |
Setaria italica (foxtail millet) | 4 | 3 | 4 |
Setaria viridis | 1 | 1 | 1 |
Severe acute respiratory syndrome coronavirus 2 | 653 | 628 | 10 |
Severe fever with thrombocytopenia syndrome virus | 2 | 2 | 2 |
Shallot yellow stripe virus | 1 | 1 | 1 |
Sheeppox virus | 3 | 3 | 3 |
Sheldgoose hepatitis B virus | 1 | 1 | 1 |
Shewanella amazonensis SB2B | 1 | 1 | 1 |
Shewanella baltica OS155 | 1 | 1 | 1 |
Shewanella baltica OS678 | 1 | 1 | 1 |
Shewanella frigidimarina NCIMB 400 | 1 | 1 | 1 |
Shewanella loihica PV-4 | 2 | 2 | 2 |
Shewanella oneidensis MR-1 | 115 | 82 | 73 |
Shewanella sp. ANA-3 | 10 | 4 | 10 |
Shigella dysenteriae Sd197 | 4 | 4 | 4 |
Shigella flexneri | 10 | 8 | 8 |
Shigella flexneri 2a str. 2457T | 14 | 13 | 12 |
Shigella flexneri 2a str. 301 | 48 | 41 | 37 |
Shigella flexneri 5 str. 8401 | 5 | 4 | 5 |
Shigella flexneri 5a str. M90T | 68 | 61 | 25 |
Shigella phage Sf6 | 2 | 2 | 2 |
Shigella sonnei | 3 | 3 | 3 |
Shigella sonnei Ss046 | 4 | 3 | 4 |
Shrimp white spot syndrome virus | 21 | 14 | 12 |
Simian adenovirus 1 | 1 | 1 | 1 |
Simian adenovirus 3 | 1 | 1 | 1 |
Simian foamy virus | 5 | 5 | 3 |
Simian immunodeficiency virus | 79 | 78 | 7 |
Simian immunodeficiency virus SIV-mnd 2 | 10 | 9 | 5 |
Simian virus 40 | 59 | 56 | 6 |
Simian-Human immunodeficiency virus | 6 | 6 | 5 |
Sin Nombre orthohantavirus | 6 | 5 | 3 |
Sindbis virus | 24 | 24 | 4 |
Singapore grouper iridovirus | 6 | 6 | 5 |
Siniperca chuatsi (mandarin fish) | 2 | 2 | 2 |
Sinorhizobium fredii NGR234 | 10 | 8 | 8 |
Sinorhizobium meliloti | 3 | 3 | 3 |
Sinorhizobium meliloti 1021 | 138 | 98 | 108 |
Sinorhizobium meliloti 2011 | 4 | 3 | 4 |
Sinorhizobium meliloti RU11/001 | 2 | 2 | 2 |
Sinorhizobium meliloti Rm41 | 1 | 1 | 1 |
Sitophilus oryzae (rice weevil) | 1 | 1 | 1 |
Sitophilus zeamais (maize weevil) | 1 | 1 | 1 |
Snow goose hepatitis B virus | 2 | 1 | 2 |
Solanum lycopersicum (tomato) | 978 | 784 | 638 |
Solanum pennellii | 2 | 2 | 2 |
Solanum tuberosum (potato) | 97 | 80 | 82 |
Sonchus yellow net nucleorhabdovirus | 1 | 1 | 1 |
Sorangium cellulosum So ce56 | 2 | 2 | 2 |
Sordaria macrospora k-hell | 4 | 3 | 4 |
Sorghum bicolor (sorghum) | 21 | 18 | 20 |
Sosuga virus | 1 | 1 | 1 |
Southern bean mosaic virus | 1 | 1 | 1 |
Southern rice black-streaked dwarf virus | 8 | 7 | 5 |
Soybean mosaic virus | 5 | 5 | 1 |
Sparus aurata (gilthead seabream) | 3 | 3 | 3 |
Sphingobium japonicum UT26S | 1 | 1 | 1 |
Sphingobium sp. SYK-6 | 5 | 3 | 5 |
Sphingomonas sp. Leaf34 | 1 | 1 | 1 |
Sphingopyxis alaskensis RB2256 | 2 | 1 | 2 |
Spinacia oleracea (spinach) | 7 | 6 | 7 |
Spiroplasma citri | 2 | 2 | 2 |
Spodoptera frugiperda ascovirus 1a | 1 | 1 | 1 |
Spodoptera frugiperda multiple nucleopolyhedrovirus | 1 | 1 | 1 |
Spodoptera litura | 3 | 3 | 3 |
Spodoptera litura nucleopolyhedrovirus | 5 | 5 | 2 |
Spodoptera litura nucleopolyhedrovirus II | 1 | 1 | 1 |
Sprivirus cyprinus | 1 | 1 | 1 |
Staphylococcus argenteus | 1 | 1 | 1 |
Staphylococcus arlettae | 1 | 1 | 1 |
Staphylococcus aureus | 101 | 90 | 77 |
Staphylococcus aureus 04-02981 | 5 | 5 | 5 |
Staphylococcus aureus 1801-1 2010 | 1 | 1 | 1 |
Staphylococcus aureus Bmb9393 | 3 | 2 | 3 |
Staphylococcus aureus RF122 | 19 | 16 | 9 |
Staphylococcus aureus subsp. aureus 11819-97 | 3 | 3 | 3 |
Staphylococcus aureus subsp. aureus 6850 | 3 | 2 | 3 |
Staphylococcus aureus subsp. aureus CN1 | 1 | 1 | 1 |
Staphylococcus aureus subsp. aureus COL | 53 | 42 | 35 |
Staphylococcus aureus subsp. aureus DSM 20231 | 7 | 6 | 7 |
Staphylococcus aureus subsp. aureus ED98 | 7 | 7 | 5 |
Staphylococcus aureus subsp. aureus JH1 | 2 | 2 | 2 |
Staphylococcus aureus subsp. aureus JKD6159 | 1 | 1 | 1 |
Staphylococcus aureus subsp. aureus M013 | 2 | 2 | 2 |
Staphylococcus aureus subsp. aureus MRSA252 | 65 | 63 | 42 |
Staphylococcus aureus subsp. aureus MSSA476 | 6 | 6 | 6 |
Staphylococcus aureus subsp. aureus MW2 | 29 | 23 | 23 |
Staphylococcus aureus subsp. aureus Mu3 | 9 | 6 | 5 |
Staphylococcus aureus subsp. aureus Mu50 | 38 | 30 | 28 |
Staphylococcus aureus subsp. aureus N315 | 55 | 50 | 44 |
Staphylococcus aureus subsp. aureus NCTC 8325 | 174 | 147 | 112 |
Staphylococcus aureus subsp. aureus ST228 | 1 | 1 | 1 |
Staphylococcus aureus subsp. aureus ST398 | 3 | 3 | 2 |
Staphylococcus aureus subsp. aureus T0131 | 1 | 1 | 1 |
Staphylococcus aureus subsp. aureus USA300_FPR3757 | 30 | 28 | 13 |
Staphylococcus aureus subsp. aureus USA300_TCH1516 | 35 | 28 | 24 |
Staphylococcus aureus subsp. aureus VC40 | 1 | 1 | 1 |
Staphylococcus aureus subsp. aureus str. Newman | 91 | 64 | 45 |
Staphylococcus carnosus subsp. carnosus TM300 | 3 | 2 | 2 |
Staphylococcus epidermidis | 6 | 4 | 6 |
Staphylococcus epidermidis ATCC 12228 | 5 | 4 | 5 |
Staphylococcus epidermidis RP62A | 27 | 24 | 18 |
Staphylococcus haemolyticus JCSC1435 | 2 | 1 | 2 |
Staphylococcus lugdunensis | 3 | 3 | 2 |
Staphylococcus lugdunensis HKU09-01 | 1 | 1 | 1 |
Staphylococcus lugdunensis N920143 | 4 | 2 | 4 |
Staphylococcus phage S25-3 | 2 | 2 | 2 |
Staphylococcus phage phiSauS-IPLA35 | 1 | 1 | 1 |
Staphylococcus pseudintermedius | 1 | 1 | 1 |
Staphylococcus pseudintermedius ED99 | 2 | 1 | 2 |
Staphylococcus saccharolyticus | 1 | 1 | 1 |
Staphylococcus saprophyticus | 1 | 1 | 1 |
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292 | 2 | 2 | 2 |
Staphylococcus saprophyticus subsp. saprophyticus MS1146 | 1 | 1 | 1 |
Staphylococcus simulans | 2 | 2 | 2 |
Staphylococcus simulans bv. staphylolyticus | 2 | 2 | 1 |
Staphylococcus warneri | 1 | 1 | 1 |
Staphylococcus warneri SG1 | 1 | 1 | 1 |
Staphylothermus marinus F1 | 1 | 1 | 1 |
Stenotrophomonas maltophilia | 2 | 2 | 2 |
Stenotrophomonas maltophilia D457 | 1 | 1 | 1 |
Stenotrophomonas maltophilia K279a | 21 | 13 | 18 |
Stenotrophomonas maltophilia R551-3 | 1 | 1 | 1 |
Stigmatella aurantiaca DW4/3-1 | 2 | 1 | 2 |
Streptobacillus moniliformis DSM 12112 | 2 | 2 | 1 |
Streptococcus agalactiae | 10 | 7 | 10 |
Streptococcus agalactiae 2603V/R | 19 | 13 | 15 |
Streptococcus agalactiae A909 | 8 | 7 | 6 |
Streptococcus agalactiae NEM316 | 15 | 10 | 13 |
Streptococcus agalactiae SA20-06 | 1 | 1 | 1 |
Streptococcus cristatus ATCC 51100 | 1 | 1 | 1 |
Streptococcus dysgalactiae subsp. equisimilis | 1 | 1 | 1 |
Streptococcus equi subsp. equi 4047 | 2 | 2 | 2 |
Streptococcus equi subsp. zooepidemicus | 3 | 3 | 3 |
Streptococcus equi subsp. zooepidemicus MGCS10565 | 2 | 2 | 2 |
Streptococcus gordonii | 1 | 1 | 1 |
Streptococcus gordonii str. Challis substr. CH1 | 24 | 17 | 22 |
Streptococcus infantis | 1 | 1 | 1 |
Streptococcus iniae | 1 | 1 | 1 |
Streptococcus mutans | 9 | 8 | 9 |
Streptococcus mutans GS-5 | 1 | 1 | 1 |
Streptococcus mutans NN2025 | 2 | 2 | 2 |
Streptococcus mutans UA159 | 191 | 144 | 121 |
Streptococcus oralis subsp. tigurinus AZ_3a | 2 | 1 | 2 |
Streptococcus parasanguinis ATCC 15912 | 2 | 2 | 1 |
Streptococcus parasanguinis FW213 | 7 | 2 | 4 |
Streptococcus phage Cp1 | 1 | 1 | 1 |
Streptococcus phage TP-J34 | 1 | 1 | 1 |
Streptococcus pneumoniae | 26 | 24 | 25 |
Streptococcus pneumoniae ATCC 700669 | 8 | 7 | 6 |
Streptococcus pneumoniae CGSP14 | 3 | 1 | 3 |
Streptococcus pneumoniae D39 | 104 | 89 | 64 |
Streptococcus pneumoniae G54 | 6 | 5 | 5 |
Streptococcus pneumoniae Hungary19A-6 | 1 | 1 | 1 |
Streptococcus pneumoniae INV104 | 1 | 1 | 1 |
Streptococcus pneumoniae R6 | 164 | 135 | 107 |
Streptococcus pneumoniae TCH8431/19A | 2 | 2 | 2 |
Streptococcus pneumoniae TIGR4 | 26 | 26 | 19 |
Streptococcus pyogenes | 33 | 30 | 21 |
Streptococcus pyogenes A20 | 1 | 1 | 1 |
Streptococcus pyogenes Alab49 | 1 | 1 | 1 |
Streptococcus pyogenes M1 GAS | 85 | 72 | 36 |
Streptococcus pyogenes MGAS10270 | 1 | 1 | 1 |
Streptococcus pyogenes MGAS10394 | 6 | 6 | 6 |
Streptococcus pyogenes MGAS10750 | 1 | 1 | 1 |
Streptococcus pyogenes MGAS15252 | 1 | 1 | 1 |
Streptococcus pyogenes MGAS1882 | 2 | 2 | 2 |
Streptococcus pyogenes MGAS2096 | 1 | 1 | 1 |
Streptococcus pyogenes MGAS315 | 9 | 8 | 9 |
Streptococcus pyogenes MGAS5005 | 23 | 17 | 16 |
Streptococcus pyogenes MGAS6180 | 1 | 1 | 1 |
Streptococcus pyogenes MGAS8232 | 10 | 9 | 8 |
Streptococcus pyogenes MGAS9429 | 4 | 4 | 4 |
Streptococcus pyogenes NZ131 | 13 | 10 | 11 |
Streptococcus pyogenes SSI-1 | 1 | 1 | 1 |
Streptococcus pyogenes str. Manfredo | 3 | 3 | 3 |
Streptococcus sanguinis SK36 | 16 | 9 | 13 |
Streptococcus suis 05ZYH33 | 9 | 9 | 8 |
Streptococcus suis 98HAH33 | 2 | 2 | 2 |
Streptococcus suis BM407 | 12 | 12 | 12 |
Streptococcus suis P1/7 | 4 | 4 | 4 |
Streptococcus suis SC84 | 1 | 1 | 1 |
Streptococcus suis YB51 | 1 | 1 | 1 |
Streptococcus thermophilus | 3 | 2 | 3 |
Streptococcus thermophilus CNRZ1066 | 3 | 2 | 3 |
Streptococcus thermophilus JIM 8232 | 3 | 2 | 3 |
Streptococcus thermophilus LMD-9 | 4 | 3 | 3 |
Streptococcus thermophilus LMG 18311 | 12 | 11 | 9 |
Streptococcus uberis 0140J | 1 | 1 | 1 |
Streptomyces avermitilis MA-4680 = NBRC 14893 | 7 | 5 | 7 |
Streptomyces azureus | 1 | 1 | 1 |
Streptomyces bingchenggensis BCW-1 | 1 | 1 | 1 |
Streptomyces cattleya NRRL 8057 = DSM 46488 | 1 | 1 | 1 |
Streptomyces clavuligerus | 5 | 5 | 4 |
Streptomyces coelicolor | 3 | 3 | 2 |
Streptomyces coelicolor A3(2) | 276 | 213 | 209 |
Streptomyces griseus subsp. griseus NBRC 13350 | 10 | 10 | 9 |
Streptomyces lividans TK24 | 1 | 1 | 1 |
Streptomyces rochei | 1 | 1 | 1 |
Streptomyces roseochromogenus subsp. oscitans DS 12.976 | 1 | 1 | 1 |
Streptomyces scabiei 87.22 | 1 | 1 | 1 |
Streptomyces sp. SirexAA-E | 2 | 2 | 2 |
Streptomyces venezuelae | 4 | 4 | 4 |
Streptomyces venezuelae ATCC 10712 | 3 | 3 | 3 |
Streptomyces viridosporus ATCC 14672 | 1 | 1 | 1 |
Strongylocentrotus purpuratus (purple sea urchin) | 93 | 72 | 75 |
Struthio camelus australis | 3 | 3 | 3 |
Sturnus vulgaris (Common starling) | 2 | 2 | 2 |
Stutzerimonas stutzeri | 1 | 1 | 1 |
Sudan ebolavirus | 2 | 2 | 2 |
Sugarcane mosaic virus | 2 | 2 | 1 |
Suid alphaherpesvirus 1 (Pseudorabies virus) | 99 | 85 | 38 |
Sulfolobus acidocaldarius | 2 | 2 | 2 |
Sulfolobus acidocaldarius DSM 639 | 17 | 13 | 15 |
Sulfolobus acidocaldarius Ron12/I | 1 | 1 | 1 |
Sulfolobus islandicus | 5 | 3 | 3 |
Sulfolobus islandicus HVE10/4 | 1 | 1 | 1 |
Sulfolobus islandicus LAL14/1 | 1 | 1 | 1 |
Sulfolobus islandicus REY15A | 5 | 4 | 4 |
Sulfolobus islandicus filamentous virus | 1 | 1 | 1 |
Sulfolobus islandicus rod-shaped virus 2 | 3 | 2 | 3 |
Sulfolobus turreted icosahedral virus 1 | 1 | 1 | 1 |
Sulfolobus turreted icosahedral virus 2 | 2 | 2 | 1 |
Sulfolobus virus Ragged Hills | 1 | 1 | 1 |
Sulfurisphaera tokodaii str. 7 | 29 | 27 | 28 |
Sus scrofa (pig) | 5122 | 3732 | 2072 |
Sus scrofa domesticus (domestic pig) | 2 | 1 | 2 |
Sweet potato chlorotic stunt virus | 1 | 1 | 1 |
Sweet potato feathery mottle virus | 2 | 2 | 1 |
Symbiobacterium thermophilum IAM 14863 | 4 | 2 | 4 |
Synechococcus elongatus PCC 6301 | 26 | 22 | 15 |
Synechococcus elongatus PCC 7942 = FACHB-805 | 28 | 22 | 21 |
Synechococcus phage Syn5 | 1 | 1 | 1 |
Synechococcus sp. CC9311 | 1 | 1 | 1 |
Synechococcus sp. CC9902 | 1 | 1 | 1 |
Synechococcus sp. PCC 7002 | 5 | 5 | 5 |
Synechococcus sp. RCC307 | 1 | 1 | 1 |
Synechocystis sp. PCC 6803 | 262 | 209 | 189 |
Synechocystis sp. PCC 6803 substr. PCC-N | 1 | 1 | 1 |
Synechocystis sp. PCC 6803 substr. PCC-P | 2 | 2 | 2 |
Syntrophotalea carbinolica DSM 2380 | 1 | 1 | 1 |
Tacaribe mammarenavirus | 5 | 4 | 3 |
Tachysurus fulvidraco (yellow catfish) | 13 | 7 | 13 |
Taenia solium (pork tapeworm) | 1 | 1 | 1 |
Taeniopygia guttata (zebra finch) | 71 | 55 | 51 |
Takifugu rubripes (torafugu) | 39 | 34 | 37 |
Talaromyces marneffei ATCC 18224 | 4 | 3 | 4 |
Talaromyces stipitatus ATCC 10500 | 4 | 1 | 4 |
Tanapox virus | 2 | 2 | 2 |
Tannerella forsythia 92A2 | 1 | 1 | 1 |
Tembusu virus | 5 | 5 | 1 |
Tetrahymena thermophila SB210 | 40 | 36 | 35 |
Tetrapisispora phaffii CBS 4417 | 1 | 1 | 1 |
Thalassiosira pseudonana CCMP1335 | 4 | 4 | 4 |
Theileria annulata | 9 | 7 | 8 |
Theileria equi strain WA | 2 | 2 | 2 |
Theilovirus | 7 | 7 | 1 |
Theobroma cacao (cacao) | 2 | 2 | 2 |
Thermoanaerobacter pseudethanolicus ATCC 33223 | 1 | 1 | 1 |
Thermobifida fusca YX | 9 | 7 | 9 |
Thermochaetoides thermophila DSM 1495 | 14 | 13 | 14 |
Thermococcus barophilus | 2 | 2 | 2 |
Thermococcus gammatolerans EJ3 | 1 | 1 | 1 |
Thermococcus kodakarensis KOD1 | 64 | 52 | 53 |
Thermococcus litoralis DSM 5473 | 3 | 3 | 2 |
Thermococcus onnurineus NA1 | 13 | 10 | 12 |
Thermococcus sibiricus MM 739 | 6 | 6 | 4 |
Thermoplasma acidophilum DSM 1728 | 27 | 25 | 25 |
Thermoplasma volcanium GSS1 | 5 | 5 | 5 |
Thermoproteus tenax Kra 1 | 1 | 1 | 1 |
Thermosynechococcus sp. NK55a | 1 | 1 | 1 |
Thermosynechococcus vestitus BP-1 | 45 | 38 | 29 |
Thermothelomyces thermophilus ATCC 42464 | 2 | 2 | 2 |
Thermothielavioides terrestris NRRL 8126 | 1 | 1 | 1 |
Thermotoga maritima MSB8 | 161 | 140 | 128 |
Thermotoga neapolitana DSM 4359 | 4 | 4 | 3 |
Thermotoga petrophila RKU-1 | 4 | 4 | 3 |
Thermus phage P23-77 | 1 | 1 | 1 |
Thermus thermophilus HB27 | 60 | 53 | 49 |
Thermus thermophilus HB8 | 223 | 203 | 166 |
Thermus thermophilus JL-18 | 1 | 1 | 1 |
Thermus thermophilus SG0.5JP17-16 | 1 | 1 | 1 |
Thioalkalivibrio nitratireducens DSM 14787 | 1 | 1 | 1 |
Thogotovirus thogotoense | 2 | 2 | 1 |
Tick-borne encephalitis virus | 13 | 13 | 1 |
Tobacco etch virus | 3 | 3 | 1 |
Tobacco mosaic virus | 20 | 20 | 4 |
Tobacco rattle virus | 3 | 3 | 2 |
Tobacco vein banding mosaic virus | 1 | 1 | 1 |
Tomato aspermy virus | 3 | 3 | 1 |
Tomato bushy stunt virus | 26 | 21 | 4 |
Tomato chlorosis virus | 4 | 4 | 1 |
Tomato golden mosaic virus | 4 | 3 | 3 |
Tomato leaf curl Gujarat virus | 2 | 2 | 2 |
Tomato leaf curl Kerala virus | 1 | 1 | 1 |
Tomato leaf curl New Delhi virus | 1 | 1 | 1 |
Tomato leaf curl Palampur virus | 1 | 1 | 1 |
Tomato leaf curl virus | 1 | 1 | 1 |
Tomato mosaic virus | 3 | 3 | 2 |
Tomato spotted wilt orthotospovirus | 14 | 13 | 3 |
Tomato torrado virus | 2 | 2 | 1 |
Tomato yellow leaf curl Sardinia virus | 2 | 2 | 1 |
Tomato yellow leaf curl Vietnam betasatellite | 1 | 1 | 1 |
Tomato yellow leaf curl virus | 6 | 6 | 2 |
Toxoplasma gondii ME49 | 152 | 131 | 108 |
Trametes versicolor FP-101664 SS1 | 5 | 4 | 5 |
Treponema denticola ATCC 35405 | 29 | 23 | 20 |
Treponema pallidum subsp. pallidum SS14 | 2 | 2 | 2 |
Treponema pallidum subsp. pallidum str. Nichols | 20 | 17 | 16 |
Tribolium castaneum (red flour beetle) | 117 | 79 | 101 |
Trichinella spiralis | 12 | 12 | 10 |
Trichoderma atroviride IMI 206040 | 6 | 5 | 5 |
Trichoderma reesei QM6a | 28 | 24 | 17 |
Trichoderma virens Gv29-8 | 2 | 2 | 2 |
Trichodesmium erythraeum IMS101 | 3 | 2 | 3 |
Trichodysplasia spinulosa-associated polyomavirus | 2 | 2 | 1 |
Trichomonas vaginalis G3 | 28 | 20 | 27 |
Trichophyton benhamiae CBS 112371 | 2 | 2 | 2 |
Trichophyton rubrum CBS 118892 | 2 | 2 | 2 |
Trichoplax adhaerens | 1 | 1 | 1 |
Trichoplusia ni single nucleopolyhedrovirus | 1 | 1 | 1 |
Trichormus variabilis ATCC 29413 | 3 | 3 | 3 |
Triticum aestivum (bread wheat) | 342 | 298 | 231 |
Trypanosoma brucei brucei TREU927 | 244 | 208 | 196 |
Trypanosoma brucei gambiense DAL972 | 3 | 3 | 2 |
Trypanosoma cruzi strain CL Brener | 109 | 100 | 85 |
Trypanosoma grayi | 3 | 3 | 3 |
Tula orthohantavirus | 3 | 3 | 2 |
Tupaia chinensis (Chinese tree shrew) | 5 | 5 | 5 |
Turkey adenovirus 3 | 1 | 1 | 1 |
Turkey astrovirus 2 | 1 | 1 | 1 |
Turkey coronavirus | 2 | 2 | 2 |
Turnip crinkle virus | 8 | 8 | 3 |
Turnip mosaic virus | 11 | 11 | 1 |
Turnip vein-clearing virus | 1 | 1 | 1 |
Turnip yellow mosaic virus | 1 | 1 | 1 |
Turnip yellows virus | 1 | 1 | 1 |
Tursiops truncatus (common bottlenose dolphin) | 4 | 4 | 4 |
UR2 sarcoma virus | 1 | 1 | 1 |
Ureaplasma parvum serovar 3 str. ATCC 700970 | 2 | 2 | 2 |
Ureaplasma urealyticum serovar 10 str. ATCC 33699 | 1 | 1 | 1 |
Ursus maritimus (polar bear) | 2 | 2 | 2 |
Ustilago maydis 521 | 28 | 27 | 25 |
Uukuniemi virus | 2 | 2 | 1 |
Vaccinia virus | 210 | 173 | 85 |
Variegated squirrel bornavirus 1 | 15 | 15 | 6 |
Variola virus (smallpox virus) | 4 | 4 | 2 |
Veillonella parvula DSM 2008 | 1 | 1 | 1 |
Venezuelan equine encephalitis virus | 11 | 11 | 2 |
Verticillium dahliae VdLs.17 | 9 | 7 | 9 |
Vesicular stomatitis Alagoas virus | 1 | 1 | 1 |
Vesicular stomatitis Indiana virus | 47 | 42 | 5 |
Vibrio alginolyticus | 13 | 12 | 12 |
Vibrio alginolyticus NBRC 15630 = ATCC 17749 | 2 | 2 | 2 |
Vibrio anguillarum 775 | 5 | 5 | 4 |
Vibrio atlanticus LGP32 | 1 | 1 | 1 |
Vibrio campbellii | 2 | 2 | 2 |
Vibrio campbellii ATCC BAA-1116 | 4 | 3 | 3 |
Vibrio cholerae | 12 | 10 | 10 |
Vibrio cholerae AM-19226 | 5 | 2 | 5 |
Vibrio cholerae M66-2 | 4 | 3 | 4 |
Vibrio cholerae MJ-1236 | 10 | 10 | 6 |
Vibrio cholerae MO10 | 1 | 1 | 1 |
Vibrio cholerae MS6 | 7 | 7 | 7 |
Vibrio cholerae O1 biovar El Tor str. N16961 | 126 | 101 | 103 |
Vibrio cholerae O1 str. 2010EL-1786 | 10 | 9 | 9 |
Vibrio cholerae O395 | 72 | 57 | 55 |
Vibrio coralliilyticus | 1 | 1 | 1 |
Vibrio harveyi | 1 | 1 | 1 |
Vibrio parahaemolyticus | 3 | 3 | 2 |
Vibrio parahaemolyticus O1:Kuk str. FDA_R31 | 1 | 1 | 1 |
Vibrio parahaemolyticus RIMD 2210633 | 71 | 51 | 44 |
Vibrio phage CTXphi | 1 | 1 | 1 |
Vibrio phage Kappa | 1 | 1 | 1 |
Vibrio rotiferianus | 1 | 1 | 1 |
Vibrio splendidus | 1 | 1 | 1 |
Vibrio vulnificus | 17 | 16 | 16 |
Vibrio vulnificus CMCP6 | 17 | 12 | 11 |
Vibrio vulnificus MO6-24/O | 14 | 10 | 12 |
Vibrio vulnificus YJ016 | 15 | 12 | 15 |
Vicugna pacos (alpaca) | 7 | 6 | 7 |
Vigna radiata (mung bean) | 5 | 4 | 4 |
Vigna unguiculata (cowpea) | 1 | 1 | 1 |
Viral hemorrhagic septicemia virus Fil3 | 4 | 4 | 3 |
Visna-maedi virus | 2 | 2 | 2 |
Vitis vinifera (wine grape) | 96 | 69 | 81 |
Vollenhovia emeryi | 1 | 1 | 1 |
Volvox carteri f. nagariensis | 1 | 1 | 1 |
Vulpes vulpes (red fox) | 1 | 1 | 1 |
Weissella cibaria | 2 | 2 | 2 |
Wenling frogfish arenavirus 1 | 1 | 1 | 1 |
West Nile virus | 66 | 65 | 3 |
Wheat dwarf virus | 1 | 1 | 1 |
Wheat streak mosaic virus | 5 | 5 | 1 |
Wheat yellow mosaic virus | 2 | 2 | 1 |
White spot syndrome virus | 5 | 5 | 3 |
Wolbachia endosymbiont of Drosophila melanogaster | 3 | 3 | 3 |
Wolbachia pipientis | 1 | 1 | 1 |
Wolinella succinogenes DSM 1740 | 7 | 3 | 5 |
Xanthobacter autotrophicus Py2 | 1 | 1 | 1 |
Xanthomonas albilineans GPE PC73 | 1 | 1 | 1 |
Xanthomonas axonopodis Xac29-1 | 1 | 1 | 1 |
Xanthomonas campestris pv. campestris str. 8004 | 31 | 20 | 25 |
Xanthomonas campestris pv. campestris str. ATCC 33913 | 49 | 36 | 41 |
Xanthomonas campestris pv. campestris str. B100 | 3 | 3 | 3 |
Xanthomonas campestris pv. raphani | 2 | 1 | 2 |
Xanthomonas campestris pv. vesicatoria str. 85-10 | 23 | 19 | 17 |
Xanthomonas citri | 3 | 2 | 3 |
Xanthomonas citri pv. citri | 1 | 1 | 1 |
Xanthomonas citri pv. citri str. 306 | 22 | 18 | 20 |
Xanthomonas citri pv. fuscans | 1 | 1 | 1 |
Xanthomonas citri pv. vignicola | 1 | 1 | 1 |
Xanthomonas citri subsp. citri Aw12879 | 1 | 1 | 1 |
Xanthomonas oryzae pv. oryzae | 1 | 1 | 1 |
Xanthomonas oryzae pv. oryzae KACC 10331 | 18 | 17 | 16 |
Xanthomonas oryzae pv. oryzae MAFF 311018 | 6 | 2 | 6 |
Xanthomonas oryzae pv. oryzae PXO99A | 15 | 11 | 15 |
Xanthomonas oryzae pv. oryzicola | 1 | 1 | 1 |
Xanthomonas oryzae pv. oryzicola BLS256 | 6 | 5 | 6 |
Xenopus laevis (African clawed frog) | 3150 | 2203 | 1657 |
Xenopus tropicalis (tropical clawed frog) | 393 | 325 | 329 |
Xenorhabdus bovienii SS-2004 | 2 | 2 | 2 |
Xenorhabdus nematophila ATCC 19061 | 2 | 2 | 2 |
Xylella fastidiosa | 2 | 1 | 2 |
Xylella fastidiosa 9a5c | 9 | 9 | 7 |
Xylella fastidiosa Temecula1 | 13 | 10 | 13 |
Yaba monkey tumor virus | 1 | 1 | 1 |
Yaba-like disease virus | 1 | 1 | 1 |
Yarrowia lipolytica CLIB122 | 22 | 17 | 19 |
Yellow fever virus | 17 | 17 | 1 |
Yersinia enterocolitica | 45 | 32 | 30 |
Yersinia enterocolitica W22703 | 7 | 4 | 7 |
Yersinia enterocolitica subsp. enterocolitica 8081 | 42 | 30 | 31 |
Yersinia pestis | 37 | 33 | 19 |
Yersinia pestis A1122 | 8 | 6 | 8 |
Yersinia pestis Angola | 2 | 2 | 2 |
Yersinia pestis CO92 | 60 | 47 | 40 |
Yersinia pestis Java 9 | 2 | 1 | 2 |
Yersinia pestis KIM10+ | 40 | 30 | 30 |
Yersinia pestis biovar Medievalis str. Harbin 35 | 2 | 1 | 2 |
Yersinia pestis biovar Microtus str. 91001 | 6 | 6 | 6 |
Yersinia phage PY54 | 1 | 1 | 1 |
Yersinia pseudotuberculosis | 6 | 5 | 6 |
Yersinia pseudotuberculosis IP 31758 | 2 | 2 | 2 |
Yersinia pseudotuberculosis IP 32953 | 37 | 28 | 31 |
Yersinia pseudotuberculosis PB1/+ | 8 | 6 | 4 |
Yersinia pseudotuberculosis YPIII | 17 | 9 | 14 |
Zaire ebolavirus | 108 | 101 | 7 |
Zanthoxylum piperitum (Japanese-pepper) | 1 | 1 | 1 |
Zanthoxylum schinifolium (qing hua jiao) | 1 | 1 | 1 |
Zea mays (maize) | 725 | 596 | 494 |
Zea mays subsp. mays (maize) | 7 | 6 | 6 |
Zika virus | 59 | 58 | 2 |
Ziziphus jujuba (common jujube) | 1 | 1 | 1 |
Zobellia galactanivorans | 1 | 1 | 1 |
Zonotrichia albicollis (white-throated sparrow) | 2 | 1 | 2 |
Zucchini yellow mosaic virus | 4 | 4 | 1 |
Zygosaccharomyces rouxii | 5 | 3 | 3 |
Zymomonas mobilis subsp. mobilis ATCC 10988 | 1 | 1 | 1 |
Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 | 14 | 11 | 13 |
Zymoseptoria tritici IPO323 | 5 | 3 | 5 |
[Bacillus thuringiensis] serovar konkukian str. 97-27 | 15 | 11 | 15 |
[Bacillus] selenitireducens MLS10 | 1 | 1 | 1 |
[Candida] auris | 5 | 5 | 3 |
[Candida] glabrata | 56 | 39 | 50 |
[Enterobacter] lignolyticus SCF1 | 4 | 3 | 4 |
[Haemophilus] ducreyi 35000HP | 41 | 25 | 25 |
[Mannheimia] succiniciproducens MBEL55E | 1 | 1 | 1 |
[Ruminococcus] gnavus ATCC 29149 | 1 | 1 | 1 |
adeno-associated virus 2 | 29 | 21 | 10 |
enterovirus D68 | 1 | 1 | 1 |
rat cytomegalovirus strain Maastricht | 1 | 1 | 1 |
rhinovirus B14 | 3 | 3 | 1 |
uncultured bacterium | 2 | 2 | 2 |