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BPSS1490 N-acetylmuramoyl-L-alanine amidase [ Burkholderia pseudomallei K96243 ]

Gene ID: 3095176, updated on 30-Jan-2018

Summary

Gene symbol
BPSS1490
Gene description
N-acetylmuramoyl-L-alanine amidase
Locus tag
BPSS1490
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Burkholderia pseudomallei K96243 (strain: K96243)
Lineage
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group

Genomic context

Location:
chromosome: 2
Sequence:
Chromosome: 2; NC_006351.1 (2031208..2032233)

Chromosome 2 - NC_006351.1Genomic Context describing neighboring genes Neighboring gene anaerobically induced outer membrane protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Miscellaneous features

  • Loc: 2031265-2031324 1 probable transmembrane helix predicted for BPSS1490 by TMHMM2.0 at aa 20-39
  • Loc: 2031400-2031864 'Pfam match to entry PF01510 Amidase_2, N-acetylmuramoyl-L-alanine amidase, score 142.5, E-value 4.9e-40'

General protein information

Names
N-acetylmuramoyl-L-alanine amidase
YP_111497.1
  • 'Similar to Ralstonia solanacearum N-acetylmuramoyl-L-alanine amidase rsc1796 or rs04196 SWALL:Q8XYG2 (EMBL:AL646066) (343 aa) fasta scores: E(): 1.2e-79, 65.31% id in 320 aa, and to Yersinia pestis probable N-acetylmuramoyl-L-alanine amidase ypo1715 or y1877 SWALL:Q8ZFI8 (EMBL:AJ414150) (283 aa) fasta scores: E(): 6.1e-40, 51.19% id in 252 aa, and to Salmonella typhi N-acetylmuramoyl-L-alanine amidase sty0927 SWALL:Q8Z834 (EMBL:AL627268) (276 aa) fasta scores: E(): 1.1e-34, 46.94% id in 262 aa'

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006351.1 Reference assembly

    Range
    2031208..2032233
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_111497.1 N-acetylmuramoyl-L-alanine amidase [Burkholderia pseudomallei K96243]

    See identical proteins and their annotated locations for YP_111497.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q63K75
    Conserved Domains (1) summary
    COG3023
    Location:56306
    AmpD; N-acetyl-anhydromuramyl-L-alanine amidase AmpD [Cell wall/membrane/envelope biogenesis]
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