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uspD universal stress protein D [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948415, updated on 10-Oct-2019

Summary

Gene symbol
uspD
Gene description
universal stress protein D
Primary source
EcoGene:EG11877
Locus tag
b3923
See related
ASAP:ABE-0012816; ECOCYC:EG11877
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3915; yiiT
Summary
UspC, UspD, and UspE play nonredundant and probably sequential roles in a pathway involved in resistance to UV irradiation . [More information is available at EcoCyc: EG11877].

Genomic context

Sequence:
NC_000913.3 (4113293..4113721)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF805 domain-containing protein YiiR Neighboring gene DUF406 domain-containing protein YiiS Neighboring gene flavodoxin/ferredoxin-NADP(+) reductase Neighboring gene fructose-1,6-bisphosphatase 2

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Process Evidence Code Pubs
response to UV IMP
Inferred from Mutant Phenotype
more info
PubMed 
response to starvation IEP
Inferred from Expression Pattern
more info
PubMed 
response to superoxide IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytosol IDA
Inferred from Direct Assay
more info
PubMed 

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4113293..4113721
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418358.1 universal stress protein D [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418358.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0AAB8
    Conserved Domains (1) summary
    PRK09982
    Location:1142
    PRK09982; universal stress protein UspD; Provisional
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