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glpG rhomboid protease [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947936, updated on 10-Oct-2019

Summary

Gene symbol
glpG
Gene description
rhomboid protease
Primary source
EcoGene:EG10397
Locus tag
b3424
See related
ASAP:ABE-0011179; ECOCYC:EG10397
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3410
Summary
Six transmembrane regions verified. [More information is available at EcoGene: EG10397]. GlpG is a protease that may be involved in intramembrane proteolysis. [More information is available at EcoCyc: EG10397].

Genomic context

Sequence:
NC_000913.3 (3560622..3561452, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene RNA-splicing ligase Neighboring gene DNA-binding transcriptional activator RtcR Neighboring gene pseudo Neighboring gene thiosulfate sulfurtransferase GlpE Neighboring gene aerobic glycerol 3-phosphate dehydrogenase

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
endopeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
endopeptidase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
identical protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
peptidase activity IEA
Inferred from Electronic Annotation
more info
 
serine-type endopeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
serine-type endopeptidase activity IDA
Inferred from Direct Assay
more info
PubMed 
serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
serine-type peptidase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
proteolysis IDA
Inferred from Direct Assay
more info
PubMed 
proteolysis IEA
Inferred from Electronic Annotation
more info
 
proteolysis IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
integral component of plasma membrane ISM
Inferred from Sequence Model
more info
PubMed 
membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
rhomboid protease
YP_026220.1

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3560622..3561452 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_026220.1 rhomboid protease [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for YP_026220.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P09391
    Conserved Domains (1) summary
    PRK10907
    Location:1276
    PRK10907; intramembrane serine protease GlpG; Provisional
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