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    pop1 POP1 homolog, ribonuclease P/MRP subunit [ Danio rerio (zebrafish) ]

    Gene ID: 799016, updated on 8-Feb-2025

    Summary

    Official Symbol
    pop1provided by ZNC
    Official Full Name
    POP1 homolog, ribonuclease P/MRP subunitprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-120911-1
    See related
    AllianceGenome:ZFIN:ZDB-GENE-120911-1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    pop-1
    Summary
    Predicted to act upstream of or within tRNA 5'-leader removal. Predicted to be part of nucleolar ribonuclease P complex and ribonuclease MRP complex. Human ortholog(s) of this gene implicated in anauxetic dysplasia 2. Orthologous to human POP1 (POP1 homolog, ribonuclease P/MRP subunit). [provided by Alliance of Genome Resources, Feb 2025]
    Orthologs
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    Genomic context

    See pop1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 16 NC_007127.7 (54674571..54687178)
    105 previous assembly GRCz10 (GCF_000002035.5) 16 NC_007127.6 (54865718..54878937)

    Chromosome 16 - NC_007127.7Genomic Context describing neighboring genes Neighboring gene F-box protein 43 Neighboring gene regulator of G protein signaling 22 Neighboring gene NIPA like domain containing 2 Neighboring gene gonadotropin releasing hormone receptor 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    acts_upstream_of_or_within tRNA 5'-leader removal IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within tRNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of nucleolar ribonuclease P complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    part_of ribonuclease MRP complex IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    ribonucleases P/MRP protein subunit POP1
    Names
    processing of precursor 1, ribonuclease P/MRP subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007127.7 Reference GRCz11 Primary Assembly

      Range
      54674571..54687178
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068214292.1XP_068070393.1  ribonucleases P/MRP protein subunit POP1

      UniProtKB/TrEMBL
      A0A8M9NZG1