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oppA periplasmic oligopeptide-binding protein [ Yersinia pestis CO92 ]

Gene ID: 1175016, updated on 6-Sep-2017

Summary

Gene symbol
oppA
Gene description
periplasmic oligopeptide-binding protein
Locus tag
YPO2182
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Yersinia pestis CO92 (strain: CO92, biovar: Orientalis)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia

Genomic context

Sequence:
NC_003143.1 (2457569..2459206)

NC_003143.1Genomic Context describing neighboring genes Neighboring gene bifunctional acetaldehyde-CoA/alcohol dehydrogenase Neighboring gene hypothetical protein Neighboring gene oligopeptide transporter permease Neighboring gene oligopeptide transport system permease

Pathways from BioSystems

  • ABC transporters, organism-specific biosystem (from KEGG)
    ABC transporters, organism-specific biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
  • ABC transporters, conserved biosystem (from KEGG)
    ABC transporters, conserved biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
  • Oligopeptide transport system, organism-specific biosystem (from KEGG)
    Oligopeptide transport system, organism-specific biosystemStructural complex; Environmental information processing; Peptide and nickel transport system
  • Oligopeptide transport system, conserved biosystem (from KEGG)
    Oligopeptide transport system, conserved biosystemStructural complex; Environmental information processing; Peptide and nickel transport system
  • Quorum sensing, organism-specific biosystem (from KEGG)
    Quorum sensing, organism-specific biosystemQuorum sensing (QS) is a regulatory system that allows bacteria to share information about cell density and adjust gene expression accordingly. All QS bacteria produce and release chemical signal mol...
  • Quorum sensing, conserved biosystem (from KEGG)
    Quorum sensing, conserved biosystemQuorum sensing (QS) is a regulatory system that allows bacteria to share information about cell density and adjust gene expression accordingly. All QS bacteria produce and release chemical signal mol...
  • beta-Lactam resistance, organism-specific biosystem (from KEGG)
    beta-Lactam resistance, organism-specific biosystemThe beta-lactam antibiotics are the most widely used group of antibiotics, which exert their effect by interfering with the structural crosslinking of peptidoglycans in bacterial cell walls. Over the...
  • beta-Lactam resistance, conserved biosystem (from KEGG)
    beta-Lactam resistance, conserved biosystemThe beta-lactam antibiotics are the most widely used group of antibiotics, which exert their effect by interfering with the structural crosslinking of peptidoglycans in bacterial cell walls. Over the...

General gene information

Miscellaneous features

  • Loc: 2457830-2457898 PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. inference = protein motif:ProSite:PS01040

General protein information

Names
periplasmic oligopeptide-binding protein

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003143.1 Reference assembly

    Range
    2457569..2459206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_002347155.1 periplasmic oligopeptide-binding protein [Yersinia pestis CO92]

    See identical proteins and their annotated locations for YP_002347155.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7CIN4
    Conserved Domains (1) summary
    PRK15104
    Location:1545
    PRK15104; oligopeptide ABC transporter substrate-binding protein OppA; Provisional
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