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SSUBM407_1994 beta-glucosidase [ Streptococcus suis BM407 ]

Gene ID: 8154906, updated on 6-Sep-2017

Summary

Gene symbol
SSUBM407_1994
Gene description
beta-glucosidase
Locus tag
SSUBM407_1994
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptococcus suis BM407 (strain: BM407)
Lineage
Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus

Genomic context

Sequence:
NC_012926.1 (2103198..2106107, complement)

NC_012926.1Genomic Context describing neighboring genes Neighboring gene beta-glucosidase Neighboring gene hypothetical protein Neighboring gene response regulator protein Neighboring gene sensor histidine kinase Neighboring gene Calcineurin-like phosphoesterase

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General gene information

Miscellaneous features

  • Loc: c2103551-2103498 ScanRegExp hit to PS00775, GLYCOSYL_HYDROL_F3, score 8e-5 inference = protein motif:Prosite:PS00775
  • Loc: c2104088-2103441 HMMPfam hit to PF00933, Glyco_hydro_3, score 1.7e-57 inference = protein motif:HMMPfam:PF00933
  • Loc: c2105705-2104902 HMMPfam hit to PF01915, Glyco_hydro_3_C, score 2.6e-36 inference = protein motif:HMMPfam:PF01915
  • Loc: c2106083-2106024, c2105996-2105928, c2105870-2105802, c2103305-2103240 4 probable transmembrane helices predicted for SSUBM407_1994 by TMHMM2.0 at aa 9-28, 38-60, 80-102 and 935-956 inference = protein motif:TMHMM:2.0

General protein information

Names
beta-glucosidase
YP_003029680.1
  • Orthologue of S. suis P17 (AM946016) SSU1929

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012926.1 Reference assembly

    Range
    2103198..2106107 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_003029680.1 beta-glucosidase [Streptococcus suis BM407]

    See identical proteins and their annotated locations for YP_003029680.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0H3N2D8
    Conserved Domains (3) summary
    COG1472
    Location:683931
    BglX; Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism]
    pfam01915
    Location:135402
    Glyco_hydro_3_C; Glycosyl hydrolase family 3 C-terminal domain
    pfam14310
    Location:469537
    Fn3-like; Fibronectin type III-like domain
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