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SSUBM407_1987 hypothetical protein [ Streptococcus suis BM407 ]

Gene ID: 8154333, updated on 6-Sep-2017

Summary

Gene symbol
SSUBM407_1987
Gene description
hypothetical protein
Locus tag
SSUBM407_1987
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptococcus suis BM407 (strain: BM407)
Lineage
Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus

Genomic context

Sequence:
NC_012926.1 (2094646..2095584, complement)

NC_012926.1Genomic Context describing neighboring genes Neighboring gene alpha amylase Neighboring gene protein nrdI Neighboring gene aspartyl-tRNA synthetase Neighboring gene acetyltransferase (GNAT) family protein Neighboring gene aldo/keto reductase

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Miscellaneous features

  • Loc: c2095173-2094928 HMMPfam hit to PF02588, DUF161, score 1.4e-25 inference = protein motif:HMMPfam:PF02588
  • Loc: c2095470-2095411, c2095368-2095300, c2095266-2095198, c2095170-2095102, c2095041-2094973 5 probable transmembrane helices predicted for SSUBM407_1987 by TMHMM2.0 at aa 39-58, 73-95, 107-129, 139-161 and 182-204 inference = protein motif:TMHMM:2.0
  • Loc: c2095473-2095207 HMMPfam hit to PF02588, DUF161, score 3.4e-19 inference = protein motif:HMMPfam:PF02588

General protein information

Names
hypothetical protein
YP_003029673.1
  • Orthologue of S. suis P17 (AM946016) SSU1922

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012926.1 Reference assembly

    Range
    2094646..2095584 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_003029673.1 hypothetical protein SSUBM407_1987 [Streptococcus suis BM407]

    See identical proteins and their annotated locations for YP_003029673.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0H3MYM0
    Conserved Domains (1) summary
    COG1284
    Location:30312
    YitT; Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains [Function unknown]
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