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leuC pseudo [ Streptococcus suis BM407 ]

Gene ID: 8154654, updated on 2-Apr-2013

Summary

Gene symbol
leuC
Gene description
pseudo
Locus tag
SSUBM407_1809
Gene type
pseudo
Organism
Streptococcus suis BM407 (strain: BM407)
Lineage
Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus

Genomic context

Sequence:
NC_012926.1 (1894185..1895493, complement)

NC_012926.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene peptide deformylase Neighboring gene 3-isopropylmalate dehydratase small subunit Neighboring gene 3-isopropylmalate dehydrogenase Neighboring gene 2-isopropylmalate synthase

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Miscellaneous features

  • Loc: c1894517-1894467 ScanRegExp hit to PS00450, ACONITASE_1, score 8e-5 inference = protein motif:Prosite:PS00450
  • Loc: c1895481-1894816, c1894814-1894233 HMMPfam hit to PF00330, Aconitase, score 4.9e-185 inference = protein motif:HMMPfam:PF00330
  • Loc: c1895493-1894185 Orthologue of S. suis P17 (AM946016) SSU1739~CDS contains a frameshift and deletion after codon 226. Similar to Lactococcus lactis subsp. cremoris (strain SK11) 3-isopropylmalate dehydratase large subunit LeuC UniProt:Q02YY1 (EMBL:CP000425) (458 aa) fasta scores: E()=7.6e-113, 66.740% id in 457 aa
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