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SSUBM407_1711 hypothetical protein [ Streptococcus suis BM407 ]

Gene ID: 8154352, updated on 6-Sep-2017

Summary

Gene symbol
SSUBM407_1711
Gene description
hypothetical protein
Locus tag
SSUBM407_1711
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptococcus suis BM407 (strain: BM407)
Lineage
Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus

Genomic context

Sequence:
NC_012926.1 (1792267..1792926)

NC_012926.1Genomic Context describing neighboring genes Neighboring gene pyruvate dehydrogenase E1 component subunit beta Neighboring gene pyruvate dehydrogenase E1 component subunit alpha Neighboring gene lipoprotein Neighboring gene lipoprotein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Miscellaneous features

  • Loc: 1792279-1792338, 1792357-1792416, 1792459-1792515, 1792552-1792620, 1792633-1792701, 1792750-1792809, 1792819-1792878 7 probable transmembrane helices predicted for SSUBM407_1711 by TMHMM2.0 at aa 5-24, 31-50, 65-83, 96-118, 123-145, 162-181 and 185-204 inference = protein motif:TMHMM:2.0
  • Loc: 1792285-1792539 HMMPfam hit to PF03458, UPF0126, score 4.6e-22 inference = protein motif:HMMPfam:PF03458
  • Loc: 1792573-1792824 HMMPfam hit to PF03458, UPF0126, score 1.2e-24 inference = protein motif:HMMPfam:PF03458

General protein information

Names
hypothetical protein
YP_003029407.1
  • Orthologue of S. suis P17 (AM946016) SSU1638

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012926.1 Reference assembly

    Range
    1792267..1792926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_003029407.1 hypothetical protein SSUBM407_1711 [Streptococcus suis BM407]

    See identical proteins and their annotated locations for YP_003029407.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0H3MXR0
    Conserved Domains (1) summary
    COG2860
    Location:4216
    YadS; Uncharacterized membrane protein YeiH [Function unknown]
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