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SSUBM407_0560 sugar PTS system transporter subunit IIBC [ Streptococcus suis BM407 ]

Gene ID: 8154979, updated on 6-Sep-2017

Summary

Gene symbol
SSUBM407_0560
Gene description
sugar PTS system transporter subunit IIBC
Locus tag
SSUBM407_0560
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptococcus suis BM407 (strain: BM407)
Lineage
Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus

Genomic context

Sequence:
NC_012926.1 (620231..621739)

NC_012926.1Genomic Context describing neighboring genes Neighboring gene suilysin (hemolysin) Neighboring gene N-acetylmannosamine-6-phosphate 2-epimerase Neighboring gene transcriptional regulator Neighboring gene metalloprotease Neighboring gene diacylglycerol kinase

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General gene information

Miscellaneous features

  • Loc: 620258-621229 HMMPfam hit to PF02378, PTS_EIIC, score 1.4e-89 inference = protein motif:HMMPfam:PF02378
  • Loc: 620264-620332, 620390-620458, 620495-620563, 620687-620755, 620813-620881, 621014-621082, 621140-621208, 621251-621319, 621338-621397 9 probable transmembrane helices predicted for SSUBM407_0560 by TMHMM2.0 at aa 12-34, 54-76, 89-111, 153-175, 195-217, 262-284, 304-326, 341-363 and 370-389 inference = protein motif:TMHMM:2.0
  • Loc: 621506-621610 HMMPfam hit to PF00367, PTS_EIIB, score 1.2e-12 inference = protein motif:HMMPfam:PF00367
  • Loc: 621542-621595 ScanRegExp hit to PS01035, PTS_EIIB_TYPE_1_CYS, score 8e-5 inference = protein motif:Prosite:PS01035

General protein information

Names
sugar PTS system transporter subunit IIBC
YP_003028322.1
  • Orthologue of S. suis P17 (AM946016) SSU1229

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012926.1 Reference assembly

    Range
    620231..621739
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_003028322.1 sugar PTS system transporter subunit IIBC [Streptococcus suis BM407]

    See identical proteins and their annotated locations for YP_003028322.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0H3MUD1
    Conserved Domains (1) summary
    cl28341
    Location:3498
    PRK10110; bifunctional PTS system maltose and glucose-specific transporter subunits IICB; Provisional
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