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SSUBM407_0594 amino acid ABC transporter permease [ Streptococcus suis BM407 ]

Gene ID: 8153667, updated on 6-Sep-2017

Summary

Gene symbol
SSUBM407_0594
Gene description
amino acid ABC transporter permease
Locus tag
SSUBM407_0594
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptococcus suis BM407 (strain: BM407)
Lineage
Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus

Genomic context

Sequence:
NC_012926.1 (662032..662691, complement)

NC_012926.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene threonyl-tRNA synthetase Neighboring gene amino acid ABC transporter permease Neighboring gene glutamine-binding protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • ABC transporters, organism-specific biosystem (from KEGG)
    ABC transporters, organism-specific biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
  • ABC transporters, conserved biosystem (from KEGG)
    ABC transporters, conserved biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
  • Putative glutamine transport system, organism-specific biosystem (from KEGG)
    Putative glutamine transport system, organism-specific biosystemStructural complex; Environmental information processing; Phosphate and amino acid transport system
  • Putative glutamine transport system, conserved biosystem (from KEGG)
    Putative glutamine transport system, conserved biosystemStructural complex; Environmental information processing; Phosphate and amino acid transport system

General gene information

Miscellaneous features

  • Loc: c662628-662560, c662523-662455, c662139-662071 3 probable transmembrane helices predicted for SSUBM407_0594 by TMHMM2.0 at aa 22-44, 57-79 and 185-207 inference = protein motif:TMHMM:2.0
  • Loc: c662646-662044 HMMPfam hit to PF00528, BPD_transp_1, score 2e-24 inference = protein motif:HMMPfam:PF00528

General protein information

Names
amino acid ABC transporter permease
YP_003028356.1
  • Orthologue of S. suis P17 (AM946016) SSU1195

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012926.1 Reference assembly

    Range
    662032..662691 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_003028356.1 amino acid ABC transporter permease [Streptococcus suis BM407]

    See identical proteins and their annotated locations for YP_003028356.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0H3N2V3
    Conserved Domains (1) summary
    COG0765
    Location:1215
    HisM; ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]
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