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SSUBM407_0609 cation-transporting ATPase [ Streptococcus suis BM407 ]

Gene ID: 8155003, updated on 6-Aug-2016

Summary

Gene symbol
SSUBM407_0609
Gene description
cation-transporting ATPase
Locus tag
SSUBM407_0609
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptococcus suis BM407 (strain: BM407)
Lineage
Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus

Genomic context

Sequence:
NC_012926.1 (676735..679071, complement)

NC_012926.1Genomic Context describing neighboring genes Neighboring gene UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Neighboring gene hypothetical protein Neighboring gene peptide chain release factor 3 Neighboring gene transposase

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Miscellaneous features

  • Loc: c678183-678163 ScanRegExp hit to PS00154, ATPASE_E1_E2, score NA inference = protein motif:Prosite:PS00154
  • Loc: c678201-677413 HMMPfam hit to PF00702, Hydrolase, score 3.3e-25 inference = protein motif:HMMPfam:PF00702
  • Loc: c678876-678520 HMMPfam hit to PF00122, E1-E2_ATPase, score 4.1e-24 inference = protein motif:HMMPfam:PF00122
  • Loc: c678966-678898, c678888-678829, c678441-678373, c678330-678262, c677298-677230, c677202-677134, c677088-677020, c676992-676924, c676905-676846, c676818-676759 10 probable transmembrane helices predicted for SSUBM407_0609 by TMHMM2.0 at aa 36-58, 62-81, 211-233, 248-270, 592-614, 624-646, 662-684, 694-716, 723-742 and 752-771 inference = protein motif:TMHMM:2.0

General protein information

Names
cation-transporting ATPase
YP_003028371.1
  • Orthologue of S. suis P17 (AM946016) SSU1180

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012926.1 Reference assembly

    Range
    676735..679071 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_003028371.1 cation-transporting ATPase [Streptococcus suis BM407]

    See identical proteins and their annotated locations for YP_003028371.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0H3N2X0
    Conserved Domains (4) summary
    cd01427
    Location:429549
    HAD_like; Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, ...
    TIGR01494
    Location:69614
    ATPase_P-type; ATPase, P-type (transporting), HAD superfamily, subfamily IC
    pfam00122
    Location:65286
    E1-E2_ATPase; E1-E2 ATPase
    pfam13246
    Location:349390
    Cation_ATPase; Cation transport ATPase (P-type)
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