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srtA sortase SrtA [ Streptococcus suis BM407 ]

Gene ID: 8153221, updated on 6-Sep-2017

Summary

Gene symbol
srtA
Gene description
sortase SrtA
Locus tag
SSUBM407_0856
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptococcus suis BM407 (strain: BM407)
Lineage
Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus

Genomic context

Sequence:
NC_012926.1 (925422..926171)

NC_012926.1Genomic Context describing neighboring genes Neighboring gene L-lactate dehydrogenase Neighboring gene DNA gyrase subunit A Neighboring gene peptidase Neighboring gene DNA repair protein RadC Neighboring gene redox-sensing transcriptional repressor Rex

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Miscellaneous features

  • Loc: 925458-925517 1 probable transmembrane helix predicted for SSUBM407_0856 by TMHMM2.0 at aa 13-32 inference = protein motif:TMHMM:2.0
  • Loc: 925710-926087 HMMPfam hit to PF04203, Sortase, score 8.5e-50 inference = protein motif:HMMPfam:PF04203

General protein information

Names
sortase SrtA
YP_003028604.1
  • Orthologue of S. suis P17 (AM946016) SSU0925
    Previously sequenced as Streptococcus suis sortase SrtA UniProt:Q8VUP7 (EMBL:AB066353) (249 aa) fasta scores: E()=1.4e-91, 100.000% id in 249 aa

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012926.1 Reference assembly

    Range
    925422..926171
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_003028604.1 sortase SrtA [Streptococcus suis BM407]

    See identical proteins and their annotated locations for YP_003028604.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0H3MVC0
    Conserved Domains (1) summary
    cd06165
    Location:91219
    Sortase_A; Sortase domain found in class A sortases
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