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glgC pseudo [ Streptococcus suis BM407 ]

Gene ID: 8153182, updated on 2-Apr-2013

Summary

Gene symbol
glgC
Gene description
pseudo
Locus tag
SSUBM407_0907
Gene type
pseudo
Organism
Streptococcus suis BM407 (strain: BM407)
Lineage
Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus

Genomic context

Sequence:
NC_012926.1 (980502..981617, complement)

NC_012926.1Genomic Context describing neighboring genes Neighboring gene 1,4-alpha-glucan-branching protein Neighboring gene glycogen synthase Neighboring gene glucose-1-phosphate adenylyltransferase Neighboring gene LysR family transcriptional regulator

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Miscellaneous features

  • Loc: c981602-981456, c981452-980844 HMMPfam hit to PF00483, NTP_transferase, score 4.6e-05 inference = protein motif:HMMPfam:PF00483
  • Loc: c981617-980502 Orthologue of S. suis P17 (AM946016) SSU0871~CDS contains a nonsense mutation (ochre) after codon 54. Similar to Bacillus subtilis glucose-1-phosphate adenylyltransferase GlgC UniProt:P39122 (EMBL:AF008220) (380 aa) blastp scores: E()=3e-21
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