Format

Send to:

Choose Destination

SSUBM407_0306 pseudo [ Streptococcus suis BM407 ]

Gene ID: 8154091, updated on 2-Apr-2013

Summary

Gene symbol
SSUBM407_0306
Gene description
pseudo
Locus tag
SSUBM407_0306
Gene type
pseudo
Organism
Streptococcus suis BM407 (strain: BM407)
Lineage
Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus

Genomic context

Sequence:
NC_012926.1 (337479..338844)

NC_012926.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent DNA helicase Neighboring gene L-asparaginase Neighboring gene universal stress protein Neighboring gene aminotransferase

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Miscellaneous features

  • Loc: 337479-338844 Orthologue of S. suis P17 (AM946016) SSU0316
    CDS contains a frameshift after codon 280. Similar to Streptococcus pneumoniae Cof family protein UniProt:Q97NM3 (EMBL:AE007488) (462 aa) fasta scores: E()=3.5e-89, 52.772% id in 451 aa
  • Loc: 337491-337526 ScanRegExp hit to PS01228, COF_1, score NA inference = protein motif:Prosite:PS01228
  • Loc: 337494-338297 HMMPfam hit to PF08282, Hydrolase_3, score 8.2e-82 inference = protein motif:HMMPfam:PF08282
Support Center