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SSUBM407_0222 mechanosensitive ion channel protein [ Streptococcus suis BM407 ]

Gene ID: 8154466, updated on 6-Sep-2017

Summary

Gene symbol
SSUBM407_0222
Gene description
mechanosensitive ion channel protein
Locus tag
SSUBM407_0222
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptococcus suis BM407 (strain: BM407)
Lineage
Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus

Genomic context

Sequence:
NC_012926.1 (239965..240813)

NC_012926.1Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene sodium:alanine symporter family protein Neighboring gene lipoprotein Neighboring gene hypothetical protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Miscellaneous features

  • Loc: 240007-240075, 240181-240249, 240277-240345 3 probable transmembrane helices predicted for SSUBM407_0222 by TMHMM2.0 at aa 15-37, 73-95 and 105-127 inference = protein motif:TMHMM:2.0
  • Loc: 240178-240786 HMMPfam hit to PF00924, MS_channel, score 1.9e-47 inference = protein motif:HMMPfam:PF00924

General protein information

Names
mechanosensitive ion channel protein
YP_003027998.1
  • Orthologue of S. suis P17 (AM946016) SSU0231

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012926.1 Reference assembly

    Range
    239965..240813
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_003027998.1 mechanosensitive ion channel protein [Streptococcus suis BM407]

    See identical proteins and their annotated locations for YP_003027998.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0H3MT26
    Conserved Domains (1) summary
    COG0668
    Location:1274
    MscS; Small-conductance mechanosensitive channel [Cell wall/membrane/envelope biogenesis]
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