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SSUBM407_0221 sodium:alanine symporter family protein [ Streptococcus suis BM407 ]

Gene ID: 8154934, updated on 7-Oct-2015

Summary

Gene symbol
SSUBM407_0221
Gene description
sodium:alanine symporter family protein
Locus tag
SSUBM407_0221
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptococcus suis BM407 (strain: BM407)
Lineage
Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus

Genomic context

Sequence:
NC_012926.1 (238566..239900)

NC_012926.1Genomic Context describing neighboring genes Neighboring gene ABC transporter ATP-binding protein Neighboring gene miscRNA Neighboring gene mechanosensitive ion channel protein Neighboring gene lipoprotein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Miscellaneous features

  • Loc: 238602-238670, 238743-238811, 238839-238907, 238995-239063, 239091-239159, 239193-239246, 239274-239342, 239457-239525, 239610-239678, 239715-239768, 239796-239864 11 probable transmembrane helices predicted for SSUBM407_0221 by TMHMM2.0 at aa 13-35, 60-82, 92-114, 144-166, 176-198, 210-227, 237-259, 298-320, 349-371, 384-401 and 411-433 inference = protein motif:TMHMM:2.0
  • Loc: 238683-239897 HMMPfam hit to PF01235, Na_Ala_symp, score 8.6e-180 inference = protein motif:HMMPfam:PF01235
  • Loc: 238824-238871 ScanRegExp hit to PS00873, NA_ALANINE_SYMP, score 8e-5 inference = protein motif:Prosite:PS00873

General protein information

Names
sodium:alanine symporter family protein
YP_003027997.1
  • Orthologue of S. suis P17 (AM946016) SSU0230

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012926.1 Reference assembly

    Range
    238566..239900
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_003027997.1 sodium:alanine symporter family protein [Streptococcus suis BM407]

    See identical proteins and their annotated locations for YP_003027997.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0H3MTC7
    Conserved Domains (1) summary
    COG1115
    Location:1444
    AlsT; Na+/alanine symporter [Amino acid transport and metabolism]
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