U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

cotl1 coactosin-like F-actin binding protein 1 [ Salmo salar (Atlantic salmon) ]

Gene ID: 106573682, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
cotl1
Gene description
coactosin-like F-actin binding protein 1
See related
Ensembl:ENSSSAG00000098390
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See cotl1 in Genome Data Viewer
Location:
chromosome: ssa16
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa16 NC_059457.1 (34666740..34671479, complement)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa16 NC_027315.1 (34051335..34056095, complement)

Chromosome ssa16 - NC_059457.1Genomic Context describing neighboring genes Neighboring gene phospholipase C, gamma 2 Neighboring gene uncharacterized LOC106573686 Neighboring gene kelch-like protein 36 Neighboring gene aldo/keto reductase Neighboring gene tyrosine aminotransferase

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of actin filament polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cortical actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of polarized growth IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
coactosin-like protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059457.1 Reference Ssal_v3.1

    Range
    34666740..34671479 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014148956.2 → XP_014004431.1  coactosin-like protein

    UniProtKB/TrEMBL
    A0A1S3MNM7, C0H764
    Related
    ENSSSAP00000144211.1, ENSSSAT00000204636.1
    Conserved Domains (1) summary
    cd11282
    Location:9 → 120
    ADF_coactosin_like; Coactosin-like members of the ADF homology domain family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.