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    Olr339 olfactory receptor 339 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 405303, updated on 30-Oct-2021

    Summary

    Official Symbol
    Olr339provided by RGD
    Official Full Name
    olfactory receptor 339provided by RGD
    Primary source
    RGD:1334091
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
    Annotation information
    Annotation category: suggests misassembly
    Orthologs
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    Genomic context

    See Olr339 in Genome Data Viewer
    Location:
    1q43
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    108 current mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (210009165..210010127)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (229722768..229723727)

    Chromosome 1 - NC_051336.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 91 Neighboring gene leupaxin Neighboring gene small nucleolar RNA U13 Neighboring gene olfactory receptor 341 Neighboring gene olfactory receptor 340 Neighboring gene olfactory receptor pseudogene 342

    Genomic regions, transcripts, and products

    General gene information

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables odorant binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables olfactory receptor activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    olfactory receptor Olr339
    Names
    olfactory receptor gene Olr339

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001000954.1NP_001000954.1  olfactory receptor Olr339

      See identical proteins and their annotated locations for NP_001000954.1

      Status: REVIEWED

      Source sequence(s)
      AABR07072032
      UniProtKB/TrEMBL
      D3ZCS8
      Conserved Domains (2) summary
      pfam00001
      Location:42291
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:40306
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 108 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mRatBN7.2 Primary Assembly

    Genomic

    1. NC_051336.1 Reference mRatBN7.2 Primary Assembly

      Range
      210009165..210010127
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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