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    bZIP48 basic leucine-zipper 48 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 814936, updated on 27-Sep-2019

    Summary

    Gene symbol
    bZIP48
    Gene description
    basic leucine-zipper 48
    Primary source
    Araport:AT2G04038
    Locus tag
    AT2G04038
    Gene type
    protein coding
    RNA name
    basic leucine-zipper 48
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtbZIP48; basic leucine-zipper 48; F3L12.14; F3L12_14

    Genomic context

    See bZIP48 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (1331919..1332419)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene hypothetical protein Neighboring gene phosphogluconate dehydrogenase (decarboxylating), NAD-binding domain protein Neighboring gene DUF2996 family protein Neighboring gene MATE efflux family protein Neighboring gene MATE efflux family protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_126441.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    regulation of transcription, DNA-templated IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    basic leucine-zipper 48
    NP_178489.1
    • basic leucine-zipper 48 (bZIP48); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: male gametophyte, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 58 (TAIR:AT1G13600.1); Has 2088 Blast hits to 2086 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 38; Plants - 1848; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      1331919..1332419
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126441.1NP_178489.1  basic leucine-zipper 48 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178489.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VS52, Q8RU59
      Conserved Domains (1) summary
      cd14702
      Location:75123
      bZIP_plant_GBF1; Basic leucine zipper (bZIP) domain of Plant G-box binding factor 1 (GBF1)-like transcription factors: a DNA-binding and dimerization domain
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