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    LOC4345998 squamosa promoter-binding-like protein 14 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4345998, updated on 13-Oct-2018

    Summary

    Gene symbol
    LOC4345998
    Gene description
    squamosa promoter-binding-like protein 14
    Locus tag
    OSNPB_080509600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    SPL14
    Expression
    Ubiquitous expression in flowers (RPKM 2.5), flower buds (RPKM 2.4) and 6 other tissues See more

    Genomic context

    See LOC4345998 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (25274473..25278865, complement)

    Chromosome 8 - NC_029263.1Genomic Context describing neighboring genes Neighboring gene beta-glucosidase 28-like Neighboring gene G patch domain-containing protein 11 Neighboring gene polygalacturonase inhibitor 1-like Neighboring gene potassium transporter 26-like

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_029263.1 Chromosome 8 Reference IRGSP-1.0 Primary Assembly

    Expression

    • Project title: Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General protein information

    Preferred Names
    squamosa promoter-binding-like protein 14
    Names
    B1168A08.33
    LOC_Os08g39890
    OSJNBa0016N23.108
    Os08g0509600
    SBP-box family member protein
    putative SBP-domain protein
    putative squamosa promoter-binding-like protein 9

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029263.1 Reference IRGSP-1.0 Primary Assembly

      Range
      25274473..25278865 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026027598.1XP_025883383.1  squamosa promoter-binding-like protein 14 isoform X2

      Conserved Domains (1) summary
      pfam03110
      Location:104178
      SBP; SBP domain
    2. XM_015795327.2XP_015650813.1  squamosa promoter-binding-like protein 14 isoform X1

      Conserved Domains (1) summary
      pfam03110
      Location:104178
      SBP; SBP domain
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