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    LOC107456533 ethanolamine-phosphate phospho-lyase [ Parasteatoda tepidariorum (common house spider) ]

    Gene ID: 107456533, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC107456533
    Gene description
    ethanolamine-phosphate phospho-lyase
    See related
    EnsemblRapid:LOC107456533
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Parasteatoda tepidariorum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Araneae; Araneomorphae; Entelegynae; Araneoidea; Theridiidae; Parasteatoda
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    Genomic context

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    See LOC107456533 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    102 current Ptep_3.0 (GCF_000365465.3) Unplaced Scaffold NW_024969681.1 (107848..127140, complement)
    100 previous assembly Ptep_1.0 (GCF_000365465.1) Unplaced Scaffold NW_015488843.1 (119823..138094, complement)

    NW_024969681.1Genomic Context describing neighboring genes Neighboring gene myotubularin-related protein 6 Neighboring gene endoribonuclease Dicer Neighboring gene uncharacterized LOC107456535 Neighboring gene forkhead box protein K2 Neighboring gene forkhead box C1-A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionary origin of type IV classical cadherins in arthropods. Sasaki M, et al. BMC Evol Biol, 2017 Jun 17. PMID 28623893, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ethanolamine-phosphate phospho-lyase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Parasteatoda tepidariorum Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ptep_3.0

    Genomic

    1. NW_024969681.1 Reference Ptep_3.0

      Range
      107848..127140 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016074414.2 → XP_015929900.1  ethanolamine-phosphate phospho-lyase isoform X1

      Related
      XP_015929900.1, XM_016074414.2
      Conserved Domains (2) summary
      cd00610
      Location:30 → 440
      OAT_like; Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, ...
      COG0160
      Location:9 → 444
      GabT; 4-aminobutyrate aminotransferase or related aminotransferase [Amino acid transport and metabolism]

    2. XM_016074415.2 → XP_015929901.1  ethanolamine-phosphate phospho-lyase isoform X2

      Related
      XP_015929901.1, XM_016074415.2
      Conserved Domains (1) summary
      PRK06148
      Location:1 → 399
      PRK06148; hypothetical protein; Provisional

    3. XM_043039260.1 → XP_042895194.1  ethanolamine-phosphate phospho-lyase isoform X2

      Related
      XP_042895194.1, XM_043039260.1
      Conserved Domains (1) summary
      PRK06148
      Location:1 → 399
      PRK06148; hypothetical protein; Provisional
    Nucleotide Protein Strain
    Heading Accession and Version

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