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    LOC107456233 amyloid-beta-like protein [ Parasteatoda tepidariorum (common house spider) ]

    Gene ID: 107456233, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC107456233
    Gene description
    amyloid-beta-like protein
    See related
    EnsemblRapid:LOC107456233
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Parasteatoda tepidariorum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Araneae; Araneomorphae; Entelegynae; Araneoidea; Theridiidae; Parasteatoda
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    102 current Ptep_3.0 (GCF_000365465.3) Unplaced Scaffold NW_024970690.1 (88552..232078)
    100 previous assembly Ptep_1.0 (GCF_000365465.1) Unplaced Scaffold NW_015488576.1 (438306..582234)

    NW_024970690.1Genomic Context describing neighboring genes Neighboring gene protein KRI1 homolog Neighboring gene ammonium transporter Rh type A Neighboring gene ammonium transporter Rh type A Neighboring gene putative uncharacterized protein DDB_G0282133

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evaluation of the impact of RNA preservation methods of spiders for de novo transcriptome assembly. Kono N, et al. Mol Ecol Resour, 2016 May. PMID 26561354
    2. Evolutionary origin of type IV classical cadherins in arthropods. Sasaki M, et al. BMC Evol Biol, 2017 Jun 17. PMID 28623893, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heparin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transition metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axonogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in central nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuronal cell body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    amyloid-beta-like protein
    Names
    beta-amyloid-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Parasteatoda tepidariorum Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ptep_3.0

    Genomic

    1. NW_024970690.1 Reference Ptep_3.0

      Range
      88552..232078
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016074055.2 → XP_015929541.1  amyloid-beta-like protein

      Related
      XP_015929541.1, XM_016074055.2
      Conserved Domains (5) summary
      smart00006
      Location:38 → 197
      A4_EXTRA; amyloid A4
      pfam02177
      Location:39 → 140
      APP_N; Amyloid A4 N-terminal heparin-binding
      pfam10515
      Location:634 → 685
      APP_amyloid; beta-amyloid precursor protein C-terminus
      pfam12924
      Location:142 → 197
      APP_Cu_bd; Copper-binding of amyloid precursor, CuBD
      pfam12925
      Location:276 → 456
      APP_E2; E2 domain of amyloid precursor protein
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases