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    LOC107451809 sonic hedgehog protein-like [ Parasteatoda tepidariorum (common house spider) ]

    Gene ID: 107451809, updated on 27-Jul-2018

    Summary

    Gene symbol
    LOC107451809
    Gene description
    sonic hedgehog protein-like
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Parasteatoda tepidariorum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Araneae; Araneomorphae; Entelegynae; Araneoidea; Theridiidae; Parasteatoda
    Also known as
    hh; hedgehog

    Genomic context

    See LOC107451809 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    101 current Ptep_2.0 (GCF_000365465.2) Unplaced Scaffold NW_018380730.1 (55634..119382, complement)
    100 previous assembly Ptep_1.0 (GCF_000365465.1) Unplaced Scaffold NW_015484587.1 (237495..301323)

    NW_018380730.1Genomic Context describing neighboring genes Neighboring gene AFG3-like protein 2 Neighboring gene FMRFamide-like neuropeptides 3

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    sonic hedgehog protein-like

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001323827.1NP_001310756.1  sonic hedgehog protein-like precursor

      Status: PROVISIONAL

      Source sequence(s)
      AB125742
      UniProtKB/TrEMBL
      Q75UQ8
      Conserved Domains (3) summary
      cd00081
      Location:196335
      Hint; Hedgehog/Intein domain, found in Hedgehog proteins as well as proteins which contain inteins and undergo protein splicing (e.g. DnaB, RIR1-2, GyrA and Pol). In protein splicing an intervening polypeptide sequence - the intein - is excised from a protein, ...
      pfam01079
      Location:185402
      Hint; Hint module
      pfam01085
      Location:36182
      HH_signal; Hedgehog amino-terminal signalling domain

    RefSeqs of Annotated Genomes: Parasteatoda tepidariorum Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ptep_2.0

    Genomic

    1. NW_018380730.1 Reference Ptep_2.0

      Range
      55634..119382 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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