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    LOC107438098 spermatogenesis-associated serine-rich protein 2 [ Parasteatoda tepidariorum (common house spider) ]

    Gene ID: 107438098, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC107438098
    Gene description
    spermatogenesis-associated serine-rich protein 2
    See related
    EnsemblRapid:LOC107438098
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Parasteatoda tepidariorum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Araneae; Araneomorphae; Entelegynae; Araneoidea; Theridiidae; Parasteatoda
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    102 current Ptep_3.0 (GCF_000365465.3) Unplaced Scaffold NW_024969629.1 (1393755..1425596)
    100 previous assembly Ptep_1.0 (GCF_000365465.1) Unplaced Scaffold NW_015464264.1 (89917..113250)

    NW_024969629.1Genomic Context describing neighboring genes Neighboring gene chitobiosyldiphosphodolichol beta-mannosyltransferase Neighboring gene unconventional myosin-XV Neighboring gene WD repeat domain phosphoinositide-interacting protein 3 Neighboring gene speckle-type POZ protein B-like Neighboring gene speckle-type POZ protein B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionary origin of type IV classical cadherins in arthropods. Sasaki M, et al. BMC Evol Biol, 2017 Jun 17. PMID 28623893, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    spermatogenesis-associated serine-rich protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Parasteatoda tepidariorum Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ptep_3.0

    Genomic

    1. NW_024969629.1 Reference Ptep_3.0

      Range
      1393755..1425596
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043048732.1 → XP_042904666.1  spermatogenesis-associated serine-rich protein 2 isoform X1

      Related
      XP_042904666.1, XM_043048732.1
      Conserved Domains (2) summary
      cd14279
      Location:30 → 66
      CUE; CUE domain found in ubiquitin-binding CUE proteins
      pfam07139
      Location:152 → 419
      DUF1387; Protein of unknown function (DUF1387)

    2. XM_043048740.1 → XP_042904674.1  spermatogenesis-associated serine-rich protein 2 isoform X2

      Related
      XP_042904674.1, XM_043048740.1
      Conserved Domains (2) summary
      cd14279
      Location:30 → 66
      CUE; CUE domain found in ubiquitin-binding CUE proteins
      pfam07139
      Location:152 → 419
      DUF1387; Protein of unknown function (DUF1387)
    Nucleotide Protein Strain
    Heading Accession and Version

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