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    LOC103330372 cytochrome c1-2, heme protein, mitochondrial [ Prunus mume (Japanese apricot) ]

    Gene ID: 103330372, updated on 18-Sep-2024

    Summary

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    Gene symbol
    LOC103330372
    Gene description
    cytochrome c1-2, heme protein, mitochondrial
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Prunus mume
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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    Genomic context

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    See LOC103330372 in Genome Data Viewer
    Location:
    chromosome: LG4
    Exon count:
    8
    Annotation release Status Assembly LG Location
    101 current P.mume_V1.0 (GCF_000346735.1) LG4 NC_024129.1 (23623251..23626537)

    Linkage Group LG4 - NC_024129.1Genomic Context describing neighboring genes Neighboring gene histone acetyltransferase type B catalytic subunit-like Neighboring gene uncharacterized LOC107880968 Neighboring gene uncharacterized LOC103330374 Neighboring gene thymidylate kinase-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_024129.1 Chromosome LG4 Reference P.mume_V1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables electron transfer activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial electron transport, ubiquinol to cytochrome c IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytochrome c1-2, heme protein, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Prunus mume Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.mume_V1.0 Primary Assembly

    Genomic

    1. NC_024129.1 Reference P.mume_V1.0 Primary Assembly

      Range
      23623251..23626537
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008232942.2 → XP_008231164.1  cytochrome c1-2, heme protein, mitochondrial

      Conserved Domains (1) summary
      pfam02167
      Location:78 → 296
      Cytochrom_C1; Cytochrome C1 family
    Nucleotide Protein
    Heading Accession and Version

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