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    LOC103320065 cytochrome c oxidase subunit 5b-2, mitochondrial-like [ Prunus mume (Japanese apricot) ]

    Gene ID: 103320065, updated on 18-Sep-2024
    Gene symbol
    LOC103320065
    Gene description
    cytochrome c oxidase subunit 5b-2, mitochondrial-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Prunus mume
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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    Location:
    chromosome: LG2
    Exon count:
    6
    Annotation release Status Assembly LG Location
    101 current P.mume_V1.0 (GCF_000346735.1) LG2 NC_024127.1 (8767630..8770041)

    Linkage Group LG2 - NC_024127.1Genomic Context describing neighboring genes Neighboring gene tRNA (cytosine(38)-C(5))-methyltransferase Neighboring gene peptidyl-prolyl cis-trans isomerase CYP95 Neighboring gene U-box domain-containing protein 2-like Neighboring gene ammonium transporter 3 member 1-like

    Genomic Sequence:
    NC_024127.1 Chromosome LG2 Reference P.mume_V1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mitochondrial electron transport, cytochrome c to oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial envelope IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    cytochrome c oxidase subunit 5b-2, mitochondrial-like

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Prunus mume Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.mume_V1.0 Primary Assembly

    Genomic

    1. NC_024127.1 Reference P.mume_V1.0 Primary Assembly

      Range
      8767630..8770041
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008221682.1 → XP_008219904.1  cytochrome c oxidase subunit 5b-2, mitochondrial-like

      Conserved Domains (1) summary
      cl00016
      Location:1 → 168
      Cyt_c_Oxidase_Vb; Cytochrome c oxidase subunit Vb. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of ...
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases