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    4833439L19Rik RIKEN cDNA 4833439L19 gene [ Mus musculus (house mouse) ]

    Gene ID: 97820, updated on 31-Jan-2019

    Summary

    Official Symbol
    4833439L19Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4833439L19 geneprovided by MGI
    Primary source
    MGI:MGI:1921162
    See related
    Ensembl:ENSMUSG00000025871
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    C81457; Kiaa1191; P33monox; 4930558H15Rik
    Expression
    Ubiquitous expression in kidney adult (RPKM 208.4), large intestine adult (RPKM 47.6) and 27 other tissues See more
    Orthologs

    Genomic context

    See 4833439L19Rik in Genome Data Viewer
    Location:
    13; 13 B1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 13 NC_000079.6 (54551218..54565382, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (54652580..54666743, complement)

    Chromosome 13 - NC_000079.6Genomic Context describing neighboring genes Neighboring gene THO complex 3 Neighboring gene predicted gene 2830 Neighboring gene SUMO-interacting motifs containing 1 Neighboring gene ADP-ribosylation factor-like 10 Neighboring gene NOP16 nucleolar protein

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    oxidation-reduction process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    putative monooxygenase p33MONOX

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001252645.1NP_001239574.1  putative monooxygenase p33MONOX isoform 2

      See identical proteins and their annotated locations for NP_001239574.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) lacks an exon in the 5' region, which results in a downstream AUG start codon, compared to variant 1. The resulting isoform (2) has a shorter N-terminus, compared to isoform 1.
      Source sequence(s)
      AK173126, BQ924175, BY265900, CD775737
      Consensus CDS
      CCDS56882.1
      UniProtKB/Swiss-Prot
      Q9DBN4
      UniProtKB/TrEMBL
      D3Z1F7
      Related
      ENSMUSP00000119874.1, ENSMUST00000153065.7
      Conserved Domains (1) summary
      pfam15302
      Location:1284
      P33MONOX; P33 mono-oxygenase
    2. NM_001252646.1NP_001239575.1  putative monooxygenase p33MONOX isoform 2

      See identical proteins and their annotated locations for NP_001239575.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) lacks two exons in the 5' region, which results in a downstream AUG start codon, compared to variant 1. The resulting isoform (2) has a shorter N-terminus, compared to isoform 1. Variants 2 and 3 encode the same isoform.
      Source sequence(s)
      AK169399, BY265900, CA461006, CD775737
      Consensus CDS
      CCDS56882.1
      UniProtKB/Swiss-Prot
      Q9DBN4
      UniProtKB/TrEMBL
      D3Z1F7
      Conserved Domains (1) summary
      pfam15302
      Location:1284
      P33MONOX; P33 mono-oxygenase
    3. NM_001252647.1NP_001239576.1  putative monooxygenase p33MONOX isoform 3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4) lacks three exons in the 5' region, which results in a downstream AUG start codon, compared to variant 1. The resulting isoform (3) has a shorter N-terminus, compared to isoform 1.
      Source sequence(s)
      AK169399, BY244215, BY265900, CD775737
      UniProtKB/Swiss-Prot
      Q9DBN4
      Conserved Domains (1) summary
      pfam15302
      Location:1198
      P33MONOX; P33 mono-oxygenase
    4. NM_001252648.1NP_001239577.1  putative monooxygenase p33MONOX isoform 4

      See identical proteins and their annotated locations for NP_001239577.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (5) lacks four exons in the 5' region, which results in a downstream AUG start codon, compared to variant 1. The resulting isoform (4) is much shorter at the N-terminus, compared to isoform 1.
      Source sequence(s)
      AK167616, BY265900, CD775737
      UniProtKB/Swiss-Prot
      Q9DBN4
      Conserved Domains (1) summary
      pfam15302
      Location:196
      P33MONOX; P33 mono-oxygenase
    5. NM_133797.4NP_598558.1  putative monooxygenase p33MONOX isoform 1

      See identical proteins and their annotated locations for NP_598558.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) encodes the longest isoform (1).
      Source sequence(s)
      AK169399, BY064355, CD775737
      Consensus CDS
      CCDS26529.1
      UniProtKB/Swiss-Prot
      Q9DBN4
      Related
      ENSMUSP00000026989.8, ENSMUST00000026989.14
      Conserved Domains (1) summary
      pfam15302
      Location:17303
      P33MONOX; P33 mono-oxygenase

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000079.6 Reference GRCm38.p4 C57BL/6J

      Range
      54551218..54565382 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006517478.3XP_006517541.1  putative monooxygenase p33MONOX isoform X1

      See identical proteins and their annotated locations for XP_006517541.1

      UniProtKB/Swiss-Prot
      Q9DBN4
      Conserved Domains (1) summary
      pfam15302
      Location:17303
      P33MONOX; P33 mono-oxygenase
    2. XM_006517479.3XP_006517542.1  putative monooxygenase p33MONOX isoform X2

      See identical proteins and their annotated locations for XP_006517542.1

      Conserved Domains (1) summary
      pfam15302
      Location:196
      P33MONOX; P33 mono-oxygenase
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