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    C87977 expressed sequence C87977 [ Mus musculus (house mouse) ]

    Gene ID: 97187, updated on 31-Jan-2019

    Summary

    Official Symbol
    C87977provided by MGI
    Official Full Name
    expressed sequence C87977provided by MGI
    Primary source
    MGI:MGI:2140708
    See related
    Ensembl:ENSMUSG00000046262
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    C85819
    Expression
    Restricted expression toward ovary adult (RPKM 1.1) See more

    Genomic context

    See C87977 in Genome Data Viewer
    Location:
    4; 4 E1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 4 NC_000070.6 (144206762..144213017, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (143796665..143802920, complement)

    Chromosome 4 - NC_000070.6Genomic Context describing neighboring genes Neighboring gene oogenesin 3 Neighboring gene oogenesin 2 Neighboring gene PRAME family member 6 pseudogene Neighboring gene preferentially expressed antigen in melanoma like 5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    novel oogenesin protein
    Names
    novel oogenesin (Oog) protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001177542.1NP_001171013.1  novel oogenesin protein

      Status: VALIDATED

      Source sequence(s)
      AK139502, AL627131
      Consensus CDS
      CCDS51362.1
      UniProtKB/TrEMBL
      A2A958
      Related
      ENSMUSP00000101383.1, ENSMUST00000105757.7

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000070.6 Reference GRCm38.p4 C57BL/6J

      Range
      144206762..144213017 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCm38.p4 129S6/SvEvTac

    Genomic

    1. NT_039291.1 Reference GRCm38.p4 129S6/SvEvTac

      Range
      27283..33527 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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