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    Echs1 enoyl Coenzyme A hydratase, short chain, 1, mitochondrial [ Mus musculus (house mouse) ]

    Gene ID: 93747, updated on 2-Oct-2018

    Summary

    Official Symbol
    Echs1provided by MGI
    Official Full Name
    enoyl Coenzyme A hydratase, short chain, 1, mitochondrialprovided by MGI
    Primary source
    MGI:MGI:2136460
    See related
    Ensembl:ENSMUSG00000025465 Vega:OTTMUSG00000027297
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    SCEH; C80529
    Expression
    Ubiquitous expression in heart adult (RPKM 119.4), kidney adult (RPKM 88.5) and 28 other tissues See more
    Orthologs

    Genomic context

    See Echs1 in Genome Data Viewer
    Location:
    7; 7 F4
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 7 NC_000073.6 (140105723..140116423, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (147291622..147302322, complement)

    Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene proline-rich acidic protein 1 Neighboring gene fucose mutarotase Neighboring gene polyamine oxidase (exo-N4-amino) Neighboring gene mitochondrial ribosome-associated GTPase 1 Neighboring gene shadow of prion protein Neighboring gene olfactory receptor 522

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    catalytic activity IEA
    Inferred from Electronic Annotation
    more info
     
    enoyl-CoA hydratase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enoyl-CoA hydratase activity ISO
    Inferred from Sequence Orthology
    more info
     
    lyase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    fatty acid beta-oxidation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    fatty acid beta-oxidation ISO
    Inferred from Sequence Orthology
    more info
     
    fatty acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    mitochondrion HDA PubMed 
    mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    enoyl-CoA hydratase, mitochondrial
    Names
    enoyl-CoA hydratase 1
    short-chain enoyl-CoA hydratase
    NP_444349.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_053119.3NP_444349.1  enoyl-CoA hydratase, mitochondrial precursor

      See identical proteins and their annotated locations for NP_444349.1

      Status: VALIDATED

      Source sequence(s)
      AK040391, BC072658
      Consensus CDS
      CCDS21964.1
      UniProtKB/Swiss-Prot
      Q8BH95
      Related
      ENSMUSP00000026538.6, OTTMUSP00000033956, ENSMUST00000026538.12
      Conserved Domains (2) summary
      PRK05617
      Location:36288
      PRK05617; 3-hydroxyisobutyryl-CoA hydrolase; Provisional
      cl23717
      Location:32288
      crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000073.6 Reference GRCm38.p4 C57BL/6J

      Range
      140105723..140116423 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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