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    Glce glucuronyl C5-epimerase [ Mus musculus (house mouse) ]

    Gene ID: 93683, updated on 8-Jul-2021

    Summary

    Official Symbol
    Glceprovided by MGI
    Official Full Name
    glucuronyl C5-epimeraseprovided by MGI
    Primary source
    MGI:MGI:2136405
    See related
    Ensembl:ENSMUSG00000032252
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hs; Hsepi; AI747411; 1110017N23Rik; C130034A12Rik
    Expression
    Ubiquitous expression in limb E14.5 (RPKM 5.6), cerebellum adult (RPKM 4.6) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Glce in Genome Data Viewer
    Location:
    9; 9 B
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (61964526..62029891, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (62057244..62122609, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (61905055..61918413, complement)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene kinesin family member 23 Neighboring gene progestin and adipoQ receptor family member V Neighboring gene predicted gene, 35152 Neighboring gene microRNA 5133 Neighboring gene predicted gene, 39351 Neighboring gene predicted gene, 35227

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in Golgi membrane TAS
    Traceable Author Statement
    more info
     
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    D-glucuronyl C5-epimerase
    Names
    heparan sulfate C5-epimerase
    heparan sulfate-glucuronic acid C5-epimerase
    heparin sulfate C5-epimerase
    heparin/heparan sulfate:glucuronic acid C5-epimerase
    heparosan-N-sulfate-glucuronate 5-epimerase
    NP_001355233.1
    NP_201577.3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001368304.1NP_001355233.1  D-glucuronyl C5-epimerase

      Status: VALIDATED

      Source sequence(s)
      AC123610
      Consensus CDS
      CCDS23262.1
      Related
      ENSMUSP00000034785.8, ENSMUST00000034785.8
    2. NM_033320.5NP_201577.3  D-glucuronyl C5-epimerase

      See identical proteins and their annotated locations for NP_201577.3

      Status: VALIDATED

      Source sequence(s)
      AC123610
      Consensus CDS
      CCDS23262.1
      UniProtKB/Swiss-Prot
      Q9EPS3
      Related
      ENSMUSP00000139949.2, ENSMUST00000185675.7
      Conserved Domains (1) summary
      pfam06662
      Location:417608
      C5-epim_C; D-glucuronyl C5-epimerase C-terminus

    RNA

    1. NR_160774.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC123610

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      61964526..62029891 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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