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    ATP6AP1L ATPase H+ transporting accessory protein 1 like (pseudogene) [ Homo sapiens (human) ]

    Gene ID: 92270, updated on 13-May-2022

    Summary

    Official Symbol
    ATP6AP1Lprovided by HGNC
    Official Full Name
    ATPase H+ transporting accessory protein 1 like (pseudogene)provided by HGNC
    Primary source
    HGNC:HGNC:28091
    See related
    AllianceGenome:HGNC:28091
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Summary
    Predicted to be involved in regulation of cellular pH. Predicted to be integral component of membrane. Predicted to be part of plasma membrane proton-transporting V-type ATPase complex. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in testis (RPKM 1.6), skin (RPKM 1.0) and 25 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See ATP6AP1L in Genome Data Viewer
    Location:
    5q14.2
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    110 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (82278650..82318806)
    110 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (82764440..82804585)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (81574469..81614625)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 9633 Neighboring gene ribosomal protein S23 Neighboring gene uncharacterized LOC124901019 Neighboring gene uncharacterized LOC105379050

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    General gene information

    Markers

    Homology

    Other Names

    • ATPase, H+ transporting, lysosomal accessory protein 1-like
    • V-type proton ATPase subunit S1-like protein
    • vacuolar proton pump subunit S1-like protein

    Clone Names

    • FLJ41309, MGC138396

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_169868.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010598
    2. NR_169870.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010598
    3. NR_169871.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010598
    4. NR_172106.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010598
    5. NR_172107.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010598
    6. NR_172108.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010598
    7. NR_172109.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010598
    8. NR_172110.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010598
    9. NR_172111.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010598
    10. NR_172112.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010598
    11. NR_172113.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010598
    12. NR_172114.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010598
    13. NR_172115.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010598
    14. NR_172116.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010598
    15. NR_172117.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010598
    16. NR_172118.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010598
    17. NR_172119.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010598
    18. NR_172120.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010598
    19. NR_172121.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010598
    20. NR_172122.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010598

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

      Range
      82278650..82318806
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060929.1 Alternate T2T-CHM13v2.0

      Range
      82764440..82804585
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001017971.4: Suppressed sequence

      Description
      NM_001017971.4: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    2. NM_001039779.1: Suppressed sequence

      Description
      NM_001039779.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
    3. NM_001349371.3: Suppressed sequence

      Description
      NM_001349371.3: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    4. NM_001349372.3: Suppressed sequence

      Description
      NM_001349372.3: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    5. NM_001349373.3: Suppressed sequence

      Description
      NM_001349373.3: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    6. NM_001349374.3: Suppressed sequence

      Description
      NM_001349374.3: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    7. NM_001386086.1: Suppressed sequence

      Description
      NM_001386086.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    8. NM_001386087.1: Suppressed sequence

      Description
      NM_001386087.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    9. NM_001386089.1: Suppressed sequence

      Description
      NM_001386089.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    10. NM_001386090.1: Suppressed sequence

      Description
      NM_001386090.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    11. NM_001386091.1: Suppressed sequence

      Description
      NM_001386091.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    12. NM_001386092.1: Suppressed sequence

      Description
      NM_001386092.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    13. NM_001386097.1: Suppressed sequence

      Description
      NM_001386097.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    14. NM_001386099.1: Suppressed sequence

      Description
      NM_001386099.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    15. NM_001386101.1: Suppressed sequence

      Description
      NM_001386101.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    16. NM_001386102.1: Suppressed sequence

      Description
      NM_001386102.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    17. NM_001386103.1: Suppressed sequence

      Description
      NM_001386103.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    18. NM_001386105.1: Suppressed sequence

      Description
      NM_001386105.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    19. NM_001386107.1: Suppressed sequence

      Description
      NM_001386107.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    20. NM_001386110.1: Suppressed sequence

      Description
      NM_001386110.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    21. NM_001386111.1: Suppressed sequence

      Description
      NM_001386111.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    22. NM_001386114.1: Suppressed sequence

      Description
      NM_001386114.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    23. NM_001386115.1: Suppressed sequence

      Description
      NM_001386115.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    24. NM_001386116.1: Suppressed sequence

      Description
      NM_001386116.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    25. NM_001386117.1: Suppressed sequence

      Description
      NM_001386117.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    26. NM_001386118.1: Suppressed sequence

      Description
      NM_001386118.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    27. NM_001386119.1: Suppressed sequence

      Description
      NM_001386119.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    28. NM_001386120.1: Suppressed sequence

      Description
      NM_001386120.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    29. NM_001386121.1: Suppressed sequence

      Description
      NM_001386121.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    30. NM_001386122.1: Suppressed sequence

      Description
      NM_001386122.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    31. NM_001386123.1: Suppressed sequence

      Description
      NM_001386123.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    32. NM_001386124.1: Suppressed sequence

      Description
      NM_001386124.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.