U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    sepS O-phosphoserine--tRNA ligase [ Ferroglobus placidus DSM 10642 ]

    Gene ID: 8778460, updated on 15-Apr-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    sepS
    Gene description
    O-phosphoserine--tRNA ligase
    Locus tag
    FERP_RS04760
    Gene type
    protein coding
    Organism
    Ferroglobus placidus DSM 10642 (strain: DSM 10642, culture-collection: DSM:10642, type-material: type strain of Ferroglobus placidus)
    Lineage
    Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus
    Old locus tag
    Ferp_0952
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_013849.1 (830516..832087, complement)

    NC_013849.1Genomic Context describing neighboring genes Neighboring gene metal-dependent transcriptional regulator Neighboring gene ribbon-helix-helix domain-containing protein Neighboring gene formate dehydrogenase accessory sulfurtransferase FdhD Neighboring gene endonuclease V Neighboring gene Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA Neighboring gene hypothetical protein Neighboring gene Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_013849.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. RNA-Dependent Cysteine Biosynthesis in Bacteria and Archaea. Mukai T, et al. mBio, 2017 May 9. PMID 28487430, Free PMC Article
    2. RNA-dependent cysteine biosynthesis in archaea. Sauerwald A, et al. Science, 2005 Mar 25. PMID 15790858
    3. Complete genome sequence of Ferroglobus placidus AEDII12DO. Anderson I, et al. Stand Genomic Sci, 2011 Oct 15. PMID 22180810, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    O-phosphoserine--tRNA ligase
    WP_012965460.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_013849.1 Reference assembly

      Range
      830516..832087 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_012965460.1 O-phosphoserine--tRNA ligase [Ferroglobus placidus]

      See identical proteins and their annotated locations for WP_012965460.1

      UniProtKB/TrEMBL
      D3RXA4
      Conserved Domains (2) summary
      PRK06253
      Location:1 → 523
      PRK06253; O-phosphoseryl-tRNA synthetase; Reviewed
      cl00268
      Location:104 → 342
      class_II_aaRS-like_core; Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA synthetases (aaRS) share a common fold and generally attach an amino acid to the 3' OH of ribose of the appropriate tRNA. PheRS is an exception in that it attaches ...
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases