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    Fbxo43 F-box protein 43 [ Mus musculus (house mouse) ]

    Gene ID: 78803, updated on 23-Jun-2021

    Summary

    Official Symbol
    Fbxo43provided by MGI
    Official Full Name
    F-box protein 43provided by MGI
    Primary source
    MGI:MGI:1926053
    See related
    Ensembl:ENSMUSG00000048230
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Emi; Emi2; 4930533G20Rik
    Expression
    Restricted expression toward testis adult (RPKM 3.7) See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Fbxo43 in Genome Data Viewer
    Location:
    15; 15 B3.1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (36150206..36170086, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (36150060..36169940, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (36079815..36094639, complement)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit 6C Neighboring gene regulator of G-protein signalling 22 Neighboring gene heterogeneous nuclear ribonucleoprotein C pseudogene Neighboring gene predicted gene, 22979 Neighboring gene polymerase (RNA) II (DNA directed) polypeptide K Neighboring gene sperm associated antigen 1 Neighboring gene predicted gene, 23754

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC107440

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    F-box only protein 43
    Names
    XErp1 homolog
    early mitotic inhibitor 2
    endogenous meiotic inhibitor 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001081253.2NP_001074722.1  F-box only protein 43 isoform 2

      See identical proteins and their annotated locations for NP_001074722.1

      Status: VALIDATED

      Source sequence(s)
      AC121577
      Consensus CDS
      CCDS37060.1
      UniProtKB/TrEMBL
      G3X9B2
      Related
      ENSMUSP00000054125.4, ENSMUST00000058643.4
      Conserved Domains (1) summary
      pfam01485
      Location:559610
      IBR; IBR domain, a half RING-finger domain
    2. NM_001368658.1NP_001355587.1  F-box only protein 43 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC121577
      Conserved Domains (1) summary
      pfam01485
      Location:606657
      IBR; IBR domain, a half RING-finger domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      36150206..36170086 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017316803.1XP_017172292.1  F-box only protein 43 isoform X1

      UniProtKB/TrEMBL
      G3X9B2
      Conserved Domains (1) summary
      pfam01485
      Location:559610
      IBR; IBR domain, a half RING-finger domain
    2. XM_006520197.3XP_006520260.1  F-box only protein 43 isoform X1

      See identical proteins and their annotated locations for XP_006520260.1

      UniProtKB/TrEMBL
      G3X9B2
      Conserved Domains (1) summary
      pfam01485
      Location:559610
      IBR; IBR domain, a half RING-finger domain
    3. XM_011245385.1XP_011243687.1  F-box only protein 43 isoform X1

      See identical proteins and their annotated locations for XP_011243687.1

      UniProtKB/TrEMBL
      G3X9B2
      Conserved Domains (1) summary
      pfam01485
      Location:559610
      IBR; IBR domain, a half RING-finger domain
    4. XM_006520198.3XP_006520261.1  F-box only protein 43 isoform X2

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_175281.1: Suppressed sequence

      Description
      NM_175281.1: This RefSeq was suppressed temporarily based on the calculation that the annotated protein was shorter than a protein or proteins from a putative ortholog.
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