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    Mrpl9 mitochondrial ribosomal protein L9 [ Mus musculus (house mouse) ]

    Gene ID: 78523, updated on 23-Jun-2021

    Summary

    Official Symbol
    Mrpl9provided by MGI
    Official Full Name
    mitochondrial ribosomal protein L9provided by MGI
    Primary source
    MGI:MGI:2137211
    See related
    Ensembl:ENSMUSG00000028140
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    L9mt; AA409733; 8030480E20Rik; C330013D18Rik
    Expression
    Ubiquitous expression in bladder adult (RPKM 22.6), liver E14 (RPKM 20.1) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Mrpl9 in Genome Data Viewer
    Location:
    3; 3 F2.1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (94350461..94356015)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (94443154..94448708)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (94247258..94252630)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700040D17 gene Neighboring gene tudor and KH domain containing protein Neighboring gene ornithine decarboxylase antizyme 3 Neighboring gene 40S ribosomal protein S2-like Neighboring gene regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1 Neighboring gene CUGBP, Elav-like family member 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of mitochondrial large ribosomal subunit ISO
    Inferred from Sequence Orthology
    more info
     
    located_in mitochondrion HDA PubMed 
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    39S ribosomal protein L9, mitochondrial
    Names
    MRP-L9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_030116.2NP_084392.1  39S ribosomal protein L9, mitochondrial

      See identical proteins and their annotated locations for NP_084392.1

      Status: PROVISIONAL

      Source sequence(s)
      AC122808
      Consensus CDS
      CCDS17593.1
      UniProtKB/Swiss-Prot
      Q99N94
      UniProtKB/TrEMBL
      Q14B21
      Related
      ENSMUSP00000029786.8, ENSMUST00000029786.14
      Conserved Domains (2) summary
      PRK00137
      Location:92222
      rplI; 50S ribosomal protein L9; Reviewed
      pfam01281
      Location:92137
      Ribosomal_L9_N; Ribosomal protein L9, N-terminal domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      94350461..94356015
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006502322.3XP_006502385.1  39S ribosomal protein L9, mitochondrial isoform X1

      Conserved Domains (1) summary
      pfam01281
      Location:105150
      Ribosomal_L9_N; Ribosomal protein L9, N-terminal domain
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