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    Pramel13 PRAME like 13 [ Mus musculus (house mouse) ]

    Gene ID: 77632, updated on 16-Oct-2021

    Summary

    Official Symbol
    Pramel13provided by MGI
    Official Full Name
    PRAME like 13provided by MGI
    Primary source
    MGI:MGI:1924882
    See related
    Ensembl:ENSMUSG00000028591
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    C86578; AU023001; Pramef12; 4930569K13Rik
    Expression
    Restricted expression toward placenta adult (RPKM 32.0) See more
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    Genomic context

    See Pramel13 in Genome Data Viewer
    Location:
    4; 4 E1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (144118244..144135037, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (144391674..144408467, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (143981577..143998367, complement)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene PRAME like 31 Neighboring gene PRAME like 15 Neighboring gene RIKEN cDNA 1700012P22 gene Neighboring gene arylacetamide deacetylase like 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables retinoic acid receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables ubiquitin ligase-substrate adaptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    part_of Cul2-RING ubiquitin ligase complex ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in chromatin ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029948.2NP_084224.1  PRAME family member 12

      See identical proteins and their annotated locations for NP_084224.1

      Status: PROVISIONAL

      Source sequence(s)
      AK019795
      Consensus CDS
      CCDS18905.1
      UniProtKB/TrEMBL
      Q9D2F1
      Related
      ENSMUSP00000030326.4, ENSMUST00000030326.10

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      144118244..144135037 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006539283.3XP_006539346.1  PRAME family member 12 isoform X1

      See identical proteins and their annotated locations for XP_006539346.1

      UniProtKB/TrEMBL
      Q9D2F1
    2. XM_006539284.4XP_006539347.1  PRAME family member 12 isoform X1

      See identical proteins and their annotated locations for XP_006539347.1

      UniProtKB/TrEMBL
      Q9D2F1
    3. XM_011250355.3XP_011248657.1  PRAME family member 12 isoform X1

      See identical proteins and their annotated locations for XP_011248657.1

      UniProtKB/TrEMBL
      Q9D2F1
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