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    Cep83 centrosomal protein 83 [ Mus musculus (house mouse) ]

    Gene ID: 77048, updated on 6-Feb-2019

    Summary

    Official Symbol
    Cep83provided by MGI
    Official Full Name
    centrosomal protein 83provided by MGI
    Primary source
    MGI:MGI:1924298
    See related
    Ensembl:ENSMUSG00000020024
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Ccdc41; 2600001G24Rik; 4921537D05Rik; 5730513H21Rik
    Expression
    Ubiquitous expression in testis adult (RPKM 7.1), CNS E11.5 (RPKM 6.8) and 27 other tissues See more
    Orthologs

    Genomic context

    See Cep83 in Genome Data Viewer
    Location:
    10; 10 C2
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 10 NC_000076.6 (94688498..94790336)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (94151535..94253081)

    Chromosome 10 - NC_000076.6Genomic Context describing neighboring genes Neighboring gene transmembrane and coiled coil domains 3 Neighboring gene microRNA 7211 Neighboring gene predicted gene, 32898 Neighboring gene centrosomal protein 83, opposite strand Neighboring gene plexin C1 Neighboring gene predicted gene, 40744

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    cell projection organization IEA
    Inferred from Electronic Annotation
    more info
     
    cilium assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    cilium assembly ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    establishment of centrosome localization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    protein localization to centrosome ISO
    Inferred from Sequence Orthology
    more info
     
    vesicle docking ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    centriole IDA
    Inferred from Direct Assay
    more info
    PubMed 
    centriole ISO
    Inferred from Sequence Orthology
    more info
     
    ciliary transition fiber ISO
    Inferred from Sequence Orthology
    more info
     
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    centrosomal protein of 83 kDa
    Names
    coiled-coil domain containing 41
    coiled-coil domain-containing protein 41

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029852.2NP_084128.2  centrosomal protein of 83 kDa

      See identical proteins and their annotated locations for NP_084128.2

      Status: VALIDATED

      Source sequence(s)
      BC070464
      Consensus CDS
      CCDS36041.1
      UniProtKB/Swiss-Prot
      Q9D5R3
      Related
      ENSMUSP00000020212.4, ENSMUST00000020212.5
      Conserved Domains (1) summary
      COG1196
      Location:39622
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000076.6 Reference GRCm38.p4 C57BL/6J

      Range
      94688498..94790336
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006514300.3XP_006514363.1  centrosomal protein of 83 kDa isoform X1

      Conserved Domains (2) summary
      PRK12704
      Location:304456
      PRK12704; phosphodiesterase; Provisional
      TIGR02168
      Location:59365
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
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