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    Cep83 centrosomal protein 83 [ Mus musculus (house mouse) ]

    Gene ID: 77048, updated on 23-Jun-2021

    Summary

    Official Symbol
    Cep83provided by MGI
    Official Full Name
    centrosomal protein 83provided by MGI
    Primary source
    MGI:MGI:1924298
    See related
    Ensembl:ENSMUSG00000020024
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Ccdc41; 2600001G24Rik; 4921537D05Rik; 5730513H21Rik
    Expression
    Ubiquitous expression in testis adult (RPKM 7.1), CNS E11.5 (RPKM 6.8) and 27 other tissues See more
    Orthologs
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    Genomic context

    See Cep83 in Genome Data Viewer
    Location:
    10; 10 C2
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (94524476..94626201)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (94688624..94790336)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (94151535..94253081)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 53583 Neighboring gene centrosomal protein 83, opposite strand Neighboring gene plexin C1 Neighboring gene predicted gene, 53599 Neighboring gene predicted gene, 40744

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Pathways from PubChem

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in centriole IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in centriole ISO
    Inferred from Sequence Orthology
    more info
     
    part_of ciliary transition fiber ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    centrosomal protein of 83 kDa
    Names
    coiled-coil domain containing 41
    coiled-coil domain-containing protein 41

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029852.2NP_084128.2  centrosomal protein of 83 kDa

      See identical proteins and their annotated locations for NP_084128.2

      Status: VALIDATED

      Source sequence(s)
      BC070464
      Consensus CDS
      CCDS36041.1
      UniProtKB/Swiss-Prot
      Q9D5R3
      Related
      ENSMUSP00000020212.5, ENSMUST00000020212.6
      Conserved Domains (1) summary
      COG1196
      Location:39622
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      94524476..94626201
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_004936303.1 RNA Sequence

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