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    Fam204a family with sequence similarity 204, member A [ Mus musculus (house mouse) ]

    Gene ID: 76539, updated on 23-Jun-2021

    Summary

    Official Symbol
    Fam204aprovided by MGI
    Official Full Name
    family with sequence similarity 204, member Aprovided by MGI
    Primary source
    MGI:MGI:1289174
    See related
    Ensembl:ENSMUSG00000057858
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    D19Ertd737; D19Ertd737e; 2310065H12Rik; 2610015K05Rik
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 6.1), CNS E14 (RPKM 3.6) and 28 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Fam204a in Genome Data Viewer
    Location:
    19 D3; 19 56.52 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (60187018..60215137, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (60197148..60226705, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (60274489..60302600, complement)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA E330013P04 gene Neighboring gene predicted gene, 41881 Neighboring gene predicted gene, 41882 Neighboring gene predicted gene, 34300

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001358271.1NP_001345200.1  protein FAM204A isoform 2

      Status: VALIDATED

      Source sequence(s)
      AK075914, BC048505, BG069480
    2. NM_001358272.1NP_001345201.1  protein FAM204A isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC102553
    3. NM_001358273.1NP_001345202.1  protein FAM204A isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC102553
      Consensus CDS
      CCDS29939.1
      Related
      ENSMUSP00000158259.2, ENSMUST00000238054.2
    4. NM_029648.7NP_083924.2  protein FAM204A isoform 1

      See identical proteins and their annotated locations for NP_083924.2

      Status: VALIDATED

      Source sequence(s)
      AK075914, BC048505, BG069480
      Consensus CDS
      CCDS29939.1
      UniProtKB/Swiss-Prot
      Q8C6C7
      Related
      ENSMUSP00000063913.2, ENSMUST00000065286.2

    RNA

    1. NR_152390.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (5) was represented as non-coding because it lacks a large portion of the coding region, including the translational start codon, found in variant 1.
      Source sequence(s)
      AC102553
    2. NR_152391.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (6) was represented as non-coding because it lacks a large portion of the coding region, including the translational start codon, found in variant 1.
      Source sequence(s)
      AA990572, AK075914, BC048505, BG069480

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      60187018..60215137 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006527444.4XP_006527507.1  protein FAM204A isoform X1

      See identical proteins and their annotated locations for XP_006527507.1

      UniProtKB/Swiss-Prot
      Q8C6C7
    2. XM_006527450.4XP_006527513.1  protein FAM204A isoform X2

      See identical proteins and their annotated locations for XP_006527513.1

    3. XM_006527447.4XP_006527510.1  protein FAM204A isoform X1

      See identical proteins and their annotated locations for XP_006527510.1

      UniProtKB/Swiss-Prot
      Q8C6C7
    4. XM_017318307.3XP_017173796.1  protein FAM204A isoform X2

    5. XM_006527445.4XP_006527508.1  protein FAM204A isoform X1

      See identical proteins and their annotated locations for XP_006527508.1

      UniProtKB/Swiss-Prot
      Q8C6C7
    6. XM_006527443.5XP_006527506.1  protein FAM204A isoform X1

      See identical proteins and their annotated locations for XP_006527506.1

      UniProtKB/Swiss-Prot
      Q8C6C7
    7. XM_036161723.1XP_036017616.1  protein FAM204A isoform X2

    8. XM_030251127.2XP_030106987.1  protein FAM204A isoform X2

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