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    Ppp1r11 protein phosphatase 1, regulatory inhibitor subunit 11 [ Mus musculus (house mouse) ]

    Gene ID: 76497, updated on 23-Jun-2021

    Summary

    Official Symbol
    Ppp1r11provided by MGI
    Official Full Name
    protein phosphatase 1, regulatory inhibitor subunit 11provided by MGI
    Primary source
    MGI:MGI:1923747
    See related
    Ensembl:ENSMUSG00000036398
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    HCG; HCG-; Hcgv; Tcte5; Tctex5; Tctex-5; AV117883; 1500041B02Rik
    Expression
    Broad expression in testis adult (RPKM 131.5), CNS E14 (RPKM 20.0) and 23 other tissues See more
    Orthologs
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    Genomic context

    See Ppp1r11 in Genome Data Viewer
    Location:
    17 B1; 17 19.16 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (37259247..37262684, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (36948355..36951792, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (37085300..37088737, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700031A10 gene Neighboring gene ring finger protein 39 Neighboring gene predicted gene, 33595 Neighboring gene RNA polymerase I subunit H Neighboring gene RNA polymerase I subunit H, antisense

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein phosphatase 1 binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables protein phosphatase inhibitor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein serine/threonine phosphatase inhibitor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables ubiquitin protein ligase activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    E3 ubiquitin-protein ligase PPP1R11
    Names
    T-complex testis expressed protein 5
    protein phosphatase 1 regulatory subunit 11
    t-complex testis-expressed 5
    NP_083908.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029632.3NP_083908.1  E3 ubiquitin-protein ligase PPP1R11

      See identical proteins and their annotated locations for NP_083908.1

      Status: VALIDATED

      Source sequence(s)
      AK162607, BB842861, BQ032907, CR956641
      Consensus CDS
      CCDS28729.1
      UniProtKB/Swiss-Prot
      Q8K1L5
      UniProtKB/TrEMBL
      A5A4Y9
      Related
      ENSMUSP00000047202.8, ENSMUST00000040402.14
      Conserved Domains (1) summary
      pfam07491
      Location:3476
      PPI_Ypi1; Protein phosphatase inhibitor

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      37259247..37262684 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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