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    0610040J01Rik RIKEN cDNA 0610040J01 gene [ Mus musculus (house mouse) ]

    Gene ID: 76261, updated on 24-Apr-2022

    Summary

    Official Symbol
    0610040J01Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 0610040J01 geneprovided by MGI
    Primary source
    MGI:MGI:1923511
    See related
    Ensembl:ENSMUSG00000060512 AllianceGenome:MGI:1923511
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AI662686
    Summary
    Predicted to be located in cell junction and nucleoplasm. Is expressed in alimentary system; brain ventricular layer; respiratory system; telencephalon; and urinary system. Orthologous to human C4orf19 (chromosome 4 open reading frame 19). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in colon adult (RPKM 18.6), stomach adult (RPKM 15.9) and 17 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See 0610040J01Rik in Genome Data Viewer
    Location:
    5; 5 C3.1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (63969834..64056968)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (63811657..63899626)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (64203734..64290858)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 30837 Neighboring gene NACHT and WD repeat domain containing 2 Neighboring gene hematological and neurological expressed 1 protein pseudogene Neighboring gene RELT-like 1 Neighboring gene RIKEN cDNA 5830416I19 gene Neighboring gene predicted gene, 25608

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in cell junction ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein C4orf19 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029554.4NP_083830.3  uncharacterized protein C4orf19 homolog

      See identical proteins and their annotated locations for NP_083830.3

      Status: PROVISIONAL

      Source sequence(s)
      AK002869
      Consensus CDS
      CCDS39092.1
      UniProtKB/Swiss-Prot
      Q99K99
      Related
      ENSMUSP00000080443.4, ENSMUST00000081747.8
      Conserved Domains (1) summary
      pfam15770
      Location:9313
      DUF4699; Domain of unknown function (DUF4699)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      63969834..64056968
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011240792.4XP_011239094.1  uncharacterized protein C4orf19 homolog isoform X1

      See identical proteins and their annotated locations for XP_011239094.1

      UniProtKB/Swiss-Prot
      Q99K99
      Conserved Domains (1) summary
      pfam15770
      Location:9313
      DUF4699; Domain of unknown function (DUF4699)
    2. XM_006504178.5XP_006504241.1  uncharacterized protein C4orf19 homolog isoform X1

      See identical proteins and their annotated locations for XP_006504241.1

      UniProtKB/Swiss-Prot
      Q99K99
      Conserved Domains (1) summary
      pfam15770
      Location:9313
      DUF4699; Domain of unknown function (DUF4699)