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    Dnttip1 deoxynucleotidyltransferase, terminal, interacting protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 76233, updated on 31-Jan-2019

    Summary

    Official Symbol
    Dnttip1provided by MGI
    Official Full Name
    deoxynucleotidyltransferase, terminal, interacting protein 1provided by MGI
    Primary source
    MGI:MGI:1923483
    See related
    Ensembl:ENSMUSG00000017299
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    6430706C13Rik
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 32.6), CNS E14 (RPKM 24.1) and 28 other tissues See more
    Orthologs

    Genomic context

    See Dnttip1 in Genome Data Viewer
    Location:
    2; 2 H3
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 2 NC_000068.7 (164746015..164768220)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (164571515..164593720)

    Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene serine protease inhibitor, Kunitz type 5 Neighboring gene WAP four-disulfide core domain 3 Neighboring gene predicted gene 11457 Neighboring gene ubiquitin-conjugating enzyme E2C Neighboring gene troponin C2, fast

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    DNA binding ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    enzyme activator activity ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    nucleosome binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleosome binding ISO
    Inferred from Sequence Orthology
    more info
     
    protein homodimerization activity ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    Component Evidence Code Pubs
    histone deacetylase complex ISO
    Inferred from Sequence Orthology
    more info
     
    nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleus ISO
    Inferred from Sequence Orthology
    more info
    PubMed 

    General protein information

    Preferred Names
    deoxynucleotidyltransferase terminal-interacting protein 1
    Names
    tdIF1
    tdT-interacting factor 1
    terminal deoxynucleotidyltransferase-interacting factor 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_133763.1NP_598524.1  deoxynucleotidyltransferase terminal-interacting protein 1

      See identical proteins and their annotated locations for NP_598524.1

      Status: PROVISIONAL

      Source sequence(s)
      BC003486
      Consensus CDS
      CCDS17054.1
      UniProtKB/Swiss-Prot
      Q99LB0
      UniProtKB/TrEMBL
      Q3THA4
      Related
      ENSMUSP00000017443.7, ENSMUST00000017443.13

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000068.7 Reference GRCm38.p4 C57BL/6J

      Range
      164746015..164768220
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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