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    Ncapg2 non-SMC condensin II complex, subunit G2 [ Mus musculus (house mouse) ]

    Gene ID: 76044, updated on 22-Aug-2021

    Summary

    Official Symbol
    Ncapg2provided by MGI
    Official Full Name
    non-SMC condensin II complex, subunit G2provided by MGI
    Primary source
    MGI:MGI:1923294
    See related
    Ensembl:ENSMUSG00000042029
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Luz; Mtb; Luzp5; mCAP-; CAP-G2; mCAP-G2; 5830426I05Rik
    Expression
    Biased expression in liver E14 (RPKM 10.5), liver E14.5 (RPKM 8.0) and 13 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Ncapg2 in Genome Data Viewer
    Location:
    12; 12 F2
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (116368969..116427152)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (116405351..116463532)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 12 NC_000078.5 (117643875..117702004)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene extended synaptotagmin-like protein 2 Neighboring gene RIKEN cDNA D430020J02 gene Neighboring gene U7 small nuclear RNA, pseudogene 1 Neighboring gene predicted gene, 25112

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    part_of condensin complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    part_of condensin complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of condensin complex TAS
    Traceable Author Statement
    more info
    PubMed 
    located_in nuclear speck ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    condensin-2 complex subunit G2
    Names
    chromosome-associated protein G2
    leucine zipper protein 5
    more than blood protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_133762.4NP_598523.3  condensin-2 complex subunit G2

      See identical proteins and their annotated locations for NP_598523.3

      Status: VALIDATED

      Source sequence(s)
      AC160634, AK081647, AK138871, AK139749, BB700949, BC076631, CK636577
      Consensus CDS
      CCDS26212.1
      UniProtKB/Swiss-Prot
      Q6DFV1
      UniProtKB/TrEMBL
      Q3UT55, Q3UU24
      Related
      ENSMUSP00000081889.4, ENSMUST00000084828.5
      Conserved Domains (2) summary
      sd00044
      Location:376404
      HEAT; HEAT repeat [structural motif]
      pfam12422
      Location:213360
      Condensin2nSMC; Condensin II non structural maintenance of chromosomes subunit

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      116368969..116427152
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036157652.1XP_036013545.1  condensin-2 complex subunit G2 isoform X1

      Conserved Domains (2) summary
      sd00044
      Location:376404
      HEAT; HEAT repeat [structural motif]
      pfam12422
      Location:213360
      Condensin2nSMC; Condensin II non structural maintenance of chromosomes subunit
    2. XM_036157653.1XP_036013546.1  condensin-2 complex subunit G2 isoform X2

      Conserved Domains (1) summary
      pfam12422
      Location:213360
      Condensin2nSMC; Condensin II non structural maintenance of chromosomes subunit
    3. XM_006516356.2XP_006516419.1  condensin-2 complex subunit G2 isoform X3

      Conserved Domains (2) summary
      sd00044
      Location:296324
      HEAT; HEAT repeat [structural motif]
      pfam12422
      Location:132280
      Condensin2nSMC; Condensin II non structural maintenance of chromosomes subunit
    4. XM_006516350.5XP_006516413.1  condensin-2 complex subunit G2 isoform X1

      See identical proteins and their annotated locations for XP_006516413.1

      UniProtKB/Swiss-Prot
      Q6DFV1
      Conserved Domains (2) summary
      sd00044
      Location:376404
      HEAT; HEAT repeat [structural motif]
      pfam12422
      Location:213360
      Condensin2nSMC; Condensin II non structural maintenance of chromosomes subunit
    5. XM_006516352.5XP_006516415.1  condensin-2 complex subunit G2 isoform X1

      See identical proteins and their annotated locations for XP_006516415.1

      UniProtKB/Swiss-Prot
      Q6DFV1
      Conserved Domains (2) summary
      sd00044
      Location:376404
      HEAT; HEAT repeat [structural motif]
      pfam12422
      Location:213360
      Condensin2nSMC; Condensin II non structural maintenance of chromosomes subunit
    6. XM_006516351.5XP_006516414.1  condensin-2 complex subunit G2 isoform X1

      See identical proteins and their annotated locations for XP_006516414.1

      UniProtKB/Swiss-Prot
      Q6DFV1
      Conserved Domains (2) summary
      sd00044
      Location:376404
      HEAT; HEAT repeat [structural motif]
      pfam12422
      Location:213360
      Condensin2nSMC; Condensin II non structural maintenance of chromosomes subunit
    7. XM_006516354.5XP_006516417.1  condensin-2 complex subunit G2 isoform X1

      See identical proteins and their annotated locations for XP_006516417.1

      UniProtKB/Swiss-Prot
      Q6DFV1
      Conserved Domains (2) summary
      sd00044
      Location:376404
      HEAT; HEAT repeat [structural motif]
      pfam12422
      Location:213360
      Condensin2nSMC; Condensin II non structural maintenance of chromosomes subunit
    8. XM_006516353.4XP_006516416.1  condensin-2 complex subunit G2 isoform X1

      See identical proteins and their annotated locations for XP_006516416.1

      UniProtKB/Swiss-Prot
      Q6DFV1
      Conserved Domains (2) summary
      sd00044
      Location:376404
      HEAT; HEAT repeat [structural motif]
      pfam12422
      Location:213360
      Condensin2nSMC; Condensin II non structural maintenance of chromosomes subunit
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