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    Klhl24 kelch-like 24 [ Mus musculus (house mouse) ]

    Gene ID: 75785, updated on 31-Jan-2019

    Summary

    Official Symbol
    Klhl24provided by MGI
    Official Full Name
    kelch-like 24provided by MGI
    Primary source
    MGI:MGI:1923035
    See related
    Ensembl:ENSMUSG00000062901
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    C85082; 1110046J11Rik; 4930429H24Rik; 6530402O20Rik
    Expression
    Ubiquitous expression in heart adult (RPKM 15.9), bladder adult (RPKM 11.6) and 25 other tissues See more
    Orthologs

    Genomic context

    See Klhl24 in Genome Data Viewer
    Location:
    16; 16 A3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 16 NC_000082.6 (20097458..20129226)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (20097627..20127817)

    Chromosome 16 - NC_000082.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA A930003A15 gene Neighboring gene kelch-like 6 Neighboring gene YEATS domain containing 2 Neighboring gene SMT3 suppressor of mif two 3 homolog 2 pseudogene Neighboring gene predicted gene, 41431 Neighboring gene MAP6 domain containing 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    intermediate filament organization ISO
    Inferred from Sequence Orthology
    more info
     
    protein autoubiquitination ISO
    Inferred from Sequence Orthology
    more info
     
    protein ubiquitination ISO
    Inferred from Sequence Orthology
    more info
     
    regulation of kainate selective glutamate receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    Cul3-RING ubiquitin ligase complex ISO
    Inferred from Sequence Orthology
    more info
     
    adherens junction ISO
    Inferred from Sequence Orthology
    more info
     
    cell junction IEA
    Inferred from Electronic Annotation
    more info
     
    cell projection IEA
    Inferred from Electronic Annotation
    more info
     
    cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    desmosome ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    kelch-like protein 24
    Names
    KRIP6
    kainate receptor-interacting protein for GluR6

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029436.3NP_083712.4  kelch-like protein 24

      See identical proteins and their annotated locations for NP_083712.4

      Status: VALIDATED

      Source sequence(s)
      AC165282
      Consensus CDS
      CCDS28042.1
      UniProtKB/Swiss-Prot
      Q8BRG6
      Related
      ENSMUSP00000023509.3, ENSMUST00000023509.4
      Conserved Domains (3) summary
      smart00612
      Location:545591
      Kelch; Kelch domain
      sd00038
      Location:354393
      Kelch; KELCH repeat [structural motif]
      cl28614
      Location:62566
      BTB; Broad-Complex, Tramtrack and Bric a brac

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000082.6 Reference GRCm38.p4 C57BL/6J

      Range
      20097458..20129226
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006522687.3XP_006522750.1  kelch-like protein 24 isoform X1

      See identical proteins and their annotated locations for XP_006522750.1

      UniProtKB/Swiss-Prot
      Q8BRG6
      Conserved Domains (3) summary
      smart00612
      Location:545591
      Kelch; Kelch domain
      sd00038
      Location:354393
      Kelch; KELCH repeat [structural motif]
      cl28614
      Location:62566
      BTB; Broad-Complex, Tramtrack and Bric a brac
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