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    Ascc2 activating signal cointegrator 1 complex subunit 2 [ Mus musculus (house mouse) ]

    Gene ID: 75452, updated on 31-Jan-2019

    Summary

    Official Symbol
    Ascc2provided by MGI
    Official Full Name
    activating signal cointegrator 1 complex subunit 2provided by MGI
    Primary source
    MGI:MGI:1922702
    See related
    Ensembl:ENSMUSG00000020412
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AI482016; ASC1p100; AW046480; 1700011I11Rik; 2610034L15Rik
    Expression
    Ubiquitous expression in testis adult (RPKM 15.3), bladder adult (RPKM 12.2) and 28 other tissues See more
    Orthologs

    Genomic context

    See Ascc2 in Genome Data Viewer
    Location:
    11; 11 A1
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 11 NC_000077.6 (4637696..4685699)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (4537796..4583388)

    Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene myotubularin related protein 3 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene predicted gene 11961 Neighboring gene ubiquinol-cytochrome c reductase, complex III subunit X Neighboring gene zinc finger, matrin type 5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • FLJ21588

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    DNA repair IEA
    Inferred from Electronic Annotation
    more info
     
    cellular response to DNA damage stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of transcription, DNA-templated ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    activating signal cointegrator 1 complex ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    activating signal cointegrator 1 complex subunit 2
    Names
    ASC-1 complex subunit P100
    trip4 complex subunit p100

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029291.1NP_083567.1  activating signal cointegrator 1 complex subunit 2

      See identical proteins and their annotated locations for NP_083567.1

      Status: PROVISIONAL

      Source sequence(s)
      BC013537
      Consensus CDS
      CCDS24387.1
      UniProtKB/Swiss-Prot
      Q91WR3
      Related
      ENSMUSP00000063272.7, ENSMUST00000070257.13
      Conserved Domains (1) summary
      cd14364
      Location:467506
      CUE_ASCC2; CUE domain found in activating signal cointegrator 1 complex subunit 2 (ASCC2) and similar proteins

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000077.6 Reference GRCm38.p4 C57BL/6J

      Range
      4637696..4685699
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006514874.3XP_006514937.1  activating signal cointegrator 1 complex subunit 2 isoform X1

      Conserved Domains (1) summary
      cd14364
      Location:353392
      CUE_ASCC2; CUE domain found in activating signal cointegrator 1 complex subunit 2 (ASCC2) and similar proteins

    RNA

    1. XR_380985.3 RNA Sequence

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