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    Ascc2 activating signal cointegrator 1 complex subunit 2 [ Mus musculus (house mouse) ]

    Gene ID: 75452, updated on 8-Jul-2021

    Summary

    Official Symbol
    Ascc2provided by MGI
    Official Full Name
    activating signal cointegrator 1 complex subunit 2provided by MGI
    Primary source
    MGI:MGI:1922702
    See related
    Ensembl:ENSMUSG00000020412
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    ASC1p; AI482016; ASC1p100; AW046480; 1700011I11Rik; 2610034L15Rik
    Expression
    Ubiquitous expression in testis adult (RPKM 15.3), bladder adult (RPKM 12.2) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Ascc2 in Genome Data Viewer
    Location:
    11; 11 A1
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (4587698..4635699)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (4637696..4685699)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (4537796..4583388)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene myotubularin related protein 3 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene predicted gene 11961 Neighboring gene ubiquinol-cytochrome c reductase, complex III subunit X Neighboring gene zinc finger, matrin type 5 Neighboring gene calcium binding protein 7

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • FLJ21588

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ubiquitin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of activating signal cointegrator 1 complex ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    activating signal cointegrator 1 complex subunit 2
    Names
    ASC-1 complex subunit P100
    trip4 complex subunit p100

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001376980.1NP_001363909.1  activating signal cointegrator 1 complex subunit 2 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AL606521
      Conserved Domains (1) summary
      cd14364
      Location:353392
      CUE_ASCC2; CUE domain found in activating signal cointegrator 1 complex subunit 2 (ASCC2) and similar proteins
    2. NM_029291.2NP_083567.1  activating signal cointegrator 1 complex subunit 2 isoform 1

      See identical proteins and their annotated locations for NP_083567.1

      Status: VALIDATED

      Source sequence(s)
      AL606521
      Consensus CDS
      CCDS24387.1
      UniProtKB/Swiss-Prot
      Q91WR3
      Related
      ENSMUSP00000063272.8, ENSMUST00000070257.14
      Conserved Domains (1) summary
      cd14364
      Location:467506
      CUE_ASCC2; CUE domain found in activating signal cointegrator 1 complex subunit 2 (ASCC2) and similar proteins

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      4587698..4635699
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_380985.5 RNA Sequence

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